Cargando…

Activity and interactions of methane seep microorganisms assessed by parallel transcription and FISH-NanoSIMS analyses

To characterize the activity and interactions of methanotrophic archaea (ANME) and Deltaproteobacteria at a methane-seeping mud volcano, we used two complimentary measures of microbial activity: a community-level analysis of the transcription of four genes (16S rRNA, methyl coenzyme M reductase A (m...

Descripción completa

Detalles Bibliográficos
Autores principales:	Dekas, Anne E, Connon, Stephanie A, Chadwick, Grayson L, Trembath-Reichert, Elizabeth, Orphan, Victoria J
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group 2016
Materias:	Original Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4817681/ https://www.ncbi.nlm.nih.gov/pubmed/26394007 http://dx.doi.org/10.1038/ismej.2015.145

Ejemplares similares

NanoSIMS imaging reveals metabolic stratification within current-producing biofilms
por: Chadwick, Grayson L., et al.
Publicado: (2019)

NanoSIMS imaging of lipid absorption by intestinal enterocytes
por: Chen, Kai, et al.
Publicado: (2022)

Simultaneous analysis of microbial identity and function using NanoSIMS
por: Li, Tianlun, et al.
Publicado: (2008)

Correction: NanoSIMS single cell analyses reveal the contrasting nitrogen sources for small phytoplankton
por: Berthelot, Hugo, et al.
Publicado: (2020)

Probing the Subcellular Localization of Hopanoid Lipids in Bacteria Using NanoSIMS
por: Doughty, David M., et al.
Publicado: (2014)

NanoSim: nanopore sequence read simulator based on statistical characterization
por: Yang, Chen, et al.
Publicado: (2017)

Trans-NanoSim characterizes and simulates nanopore RNA-sequencing data
por: Hafezqorani, Saber, et al.
Publicado: (2020)

Characterization and simulation of metagenomic nanopore sequencing data with Meta-NanoSim
por: Yang, Chen, et al.
Publicado: (2023)

Stable Isotope Phenotyping via Cluster Analysis of NanoSIMS Data As a Method for Characterizing Distinct Microbial Ecophysiologies and Sulfur-Cycling in the Environment
por: Dawson, Katherine S., et al.
Publicado: (2016)

Correlative SIP-FISH-Raman-SEM-NanoSIMS links identity, morphology, biochemistry, and physiology of environmental microbes
por: Schaible, George A., et al.
Publicado: (2022)

NanoSIMS sulfur isotopic analysis at 100 nm scale by imaging technique
por: Hao, Jia-Long, et al.
Publicado: (2023)

Advancements in the application of NanoSIMS and Raman microspectroscopy to investigate the activity of microbial cells in soils
por: Eichorst, Stephanie A., et al.
Publicado: (2015)

Localization and Absolute Quantification of Dopamine in Discrete Intravesicular Compartments Using NanoSIMS Imaging
por: Rabasco, Stefania, et al.
Publicado: (2021)

NanoSIMS imaging of extracellular electron transport processes during microbial iron(III) reduction
por: Newsome, Laura, et al.
Publicado: (2018)

Using NanoSIMS coupled with microfluidics to visualize the early stages of coral infection by Vibrio coralliilyticus
por: Gibbin, E., et al.
Publicado: (2018)

NanoSIMS observations of mouse retinal cells reveal strict metabolic controls on nitrogen turnover
por: Bonnin, Elisa A., et al.
Publicado: (2021)

NanoSIMS Imaging Reveals the Impact of Ligand-ASO Conjugate Stability on ASO Subcellular Distribution
por: Kay, Emma, et al.
Publicado: (2022)

NanoSIMS Analysis of Rare Earth Elements in Silicate Glass and Zircon: Implications for Partition Coefficients
por: Shi, Lanlan, et al.
Publicado: (2022)

Microsporidia-nematode associations in methane seeps reveal basal fungal parasitism in the deep sea
por: Sapir, Amir, et al.
Publicado: (2014)

NanoSIMS and tissue autoradiography reveal symbiont carbon fixation and organic carbon transfer to giant ciliate host
por: Volland, Jean-Marie, et al.
Publicado: (2018)

Correlation of fluorescence microscopy, electron microscopy, and NanoSIMS stable isotope imaging on a single tissue section
por: Loussert-Fonta, Céline, et al.
Publicado: (2020)

Dissimilatory Fe(III) Reduction Controls on Arsenic Mobilization: A Combined Biogeochemical and NanoSIMS Imaging Approach
por: Lopez-Adams, Rebeca, et al.
Publicado: (2021)

Calculation and Interpretation of Substrate Assimilation Rates in Microbial Cells Based on Isotopic Composition Data Obtained by nanoSIMS
por: Polerecky, Lubos, et al.
Publicado: (2021)

Characterization of Stress Granule Protein Turnover in Neuronal Progenitor Cells Using Correlative STED and NanoSIMS Imaging
por: Rabasco, Stefania, et al.
Publicado: (2023)

Methane Seep Carbonates Host Distinct, Diverse, and Dynamic Microbial Assemblages
por: Case, David H., et al.
Publicado: (2015)

Calculation of Single Cell Assimilation Rates From SIP-NanoSIMS-Derived Isotope Ratios: A Comprehensive Approach
por: Stryhanyuk, Hryhoriy, et al.
Publicado: (2018)

Use of NanoSIMS to Identify the Lower Limits of Metabolic Activity and Growth by Serratia liquefaciens Exposed to Sub-Zero Temperatures
por: Schwendner, Petra, et al.
Publicado: (2021)

NanoSIMS combined with fluorescence microscopy as a tool for subcellular imaging of isotopically labeled platinum-based anticancer drugs
por: Legin, Anton A., et al.
Publicado: (2014)

NanoSIMS analysis of water content in bridgmanite at the micron scale: An experimental approach to probe water in Earth’s deep mantle
por: Yang, Ya-Nan, et al.
Publicado: (2023)

Temperature and feeding induce tissue level changes in autotrophic and heterotrophic nutrient allocation in the coral symbiosis – A NanoSIMS study
por: Krueger, Thomas, et al.
Publicado: (2018)

Electron microscopic imaging and NanoSIMS investigation on physiological responses of Aspergillus niger under Pb(II) and Cd(II) stress
por: Pan, Shang, et al.
Publicado: (2023)

Corrigendum: NanoSIMS analysis of water content in bridgmanite at the micron scale: an experimental approach to probe water in Earth’s deep mantle
por: Yang, Ya-Nan, et al.
Publicado: (2023)

Stable isotope labeling and ultra-high-resolution NanoSIMS imaging reveal alpha-synuclein-induced changes in neuronal metabolism in vivo
por: Spataro, Sofia, et al.
Publicado: (2023)

Carbonate-hosted microbial communities are prolific and pervasive methane oxidizers at geologically diverse marine methane seep sites
por: Marlow, Jeffrey J., et al.
Publicado: (2021)

High-resolution visualization and quantification of nucleic acid–based therapeutics in cells and tissues using Nanoscale secondary ion mass spectrometry (NanoSIMS)
por: He, Cuiwen, et al.
Publicado: (2020)

Cenozoic Methane-Seep Faunas of the Caribbean Region
por: Kiel, Steffen, et al.
Publicado: (2015)

A preliminary investigation into the use of molecular oxide and hydride secondary ion relationships for improvement of the (236)U/(238)U determination on a NanoSIMS 50L
por: Zirakparvar, N. Alex, et al.
Publicado: (2020)

Comparative metagenomics of hydrocarbon and methane seeps of the Gulf of Mexico
por: Vigneron, Adrien, et al.
Publicado: (2017)

Metal-Driven Anaerobic Oxidation of Methane as an Important Methane Sink in Methanic Cold Seep Sediments
por: Xiao, Xi, et al.
Publicado: (2023)

Controls on Interspecies Electron Transport and Size Limitation of Anaerobically Methane-Oxidizing Microbial Consortia
por: He, Xiaojia, et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_m103g1f26g8u7pj63b1ibbnnre