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A Simple and Accurate Model to Predict Responses to Multi-electrode Stimulation in the Retina

Implantable electrode arrays are widely used in therapeutic stimulation of the nervous system (e.g. cochlear, retinal, and cortical implants). Currently, most neural prostheses use serial stimulation (i.e. one electrode at a time) despite this severely limiting the repertoire of stimuli that can be...

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Autores principales: Maturana, Matias I., Apollo, Nicholas V., Hadjinicolaou, Alex E., Garrett, David J., Cloherty, Shaun L., Kameneva, Tatiana, Grayden, David B., Ibbotson, Michael R., Meffin, Hamish
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4818105/
https://www.ncbi.nlm.nih.gov/pubmed/27035143
http://dx.doi.org/10.1371/journal.pcbi.1004849
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author Maturana, Matias I.
Apollo, Nicholas V.
Hadjinicolaou, Alex E.
Garrett, David J.
Cloherty, Shaun L.
Kameneva, Tatiana
Grayden, David B.
Ibbotson, Michael R.
Meffin, Hamish
author_facet Maturana, Matias I.
Apollo, Nicholas V.
Hadjinicolaou, Alex E.
Garrett, David J.
Cloherty, Shaun L.
Kameneva, Tatiana
Grayden, David B.
Ibbotson, Michael R.
Meffin, Hamish
author_sort Maturana, Matias I.
collection PubMed
description Implantable electrode arrays are widely used in therapeutic stimulation of the nervous system (e.g. cochlear, retinal, and cortical implants). Currently, most neural prostheses use serial stimulation (i.e. one electrode at a time) despite this severely limiting the repertoire of stimuli that can be applied. Methods to reliably predict the outcome of multi-electrode stimulation have not been available. Here, we demonstrate that a linear-nonlinear model accurately predicts neural responses to arbitrary patterns of stimulation using in vitro recordings from single retinal ganglion cells (RGCs) stimulated with a subretinal multi-electrode array. In the model, the stimulus is projected onto a low-dimensional subspace and then undergoes a nonlinear transformation to produce an estimate of spiking probability. The low-dimensional subspace is estimated using principal components analysis, which gives the neuron’s electrical receptive field (ERF), i.e. the electrodes to which the neuron is most sensitive. Our model suggests that stimulation proportional to the ERF yields a higher efficacy given a fixed amount of power when compared to equal amplitude stimulation on up to three electrodes. We find that the model captures the responses of all the cells recorded in the study, suggesting that it will generalize to most cell types in the retina. The model is computationally efficient to evaluate and, therefore, appropriate for future real-time applications including stimulation strategies that make use of recorded neural activity to improve the stimulation strategy.
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spelling pubmed-48181052016-04-19 A Simple and Accurate Model to Predict Responses to Multi-electrode Stimulation in the Retina Maturana, Matias I. Apollo, Nicholas V. Hadjinicolaou, Alex E. Garrett, David J. Cloherty, Shaun L. Kameneva, Tatiana Grayden, David B. Ibbotson, Michael R. Meffin, Hamish PLoS Comput Biol Research Article Implantable electrode arrays are widely used in therapeutic stimulation of the nervous system (e.g. cochlear, retinal, and cortical implants). Currently, most neural prostheses use serial stimulation (i.e. one electrode at a time) despite this severely limiting the repertoire of stimuli that can be applied. Methods to reliably predict the outcome of multi-electrode stimulation have not been available. Here, we demonstrate that a linear-nonlinear model accurately predicts neural responses to arbitrary patterns of stimulation using in vitro recordings from single retinal ganglion cells (RGCs) stimulated with a subretinal multi-electrode array. In the model, the stimulus is projected onto a low-dimensional subspace and then undergoes a nonlinear transformation to produce an estimate of spiking probability. The low-dimensional subspace is estimated using principal components analysis, which gives the neuron’s electrical receptive field (ERF), i.e. the electrodes to which the neuron is most sensitive. Our model suggests that stimulation proportional to the ERF yields a higher efficacy given a fixed amount of power when compared to equal amplitude stimulation on up to three electrodes. We find that the model captures the responses of all the cells recorded in the study, suggesting that it will generalize to most cell types in the retina. The model is computationally efficient to evaluate and, therefore, appropriate for future real-time applications including stimulation strategies that make use of recorded neural activity to improve the stimulation strategy. Public Library of Science 2016-04-01 /pmc/articles/PMC4818105/ /pubmed/27035143 http://dx.doi.org/10.1371/journal.pcbi.1004849 Text en © 2016 Maturana et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Maturana, Matias I.
Apollo, Nicholas V.
Hadjinicolaou, Alex E.
Garrett, David J.
Cloherty, Shaun L.
Kameneva, Tatiana
Grayden, David B.
Ibbotson, Michael R.
Meffin, Hamish
A Simple and Accurate Model to Predict Responses to Multi-electrode Stimulation in the Retina
title A Simple and Accurate Model to Predict Responses to Multi-electrode Stimulation in the Retina
title_full A Simple and Accurate Model to Predict Responses to Multi-electrode Stimulation in the Retina
title_fullStr A Simple and Accurate Model to Predict Responses to Multi-electrode Stimulation in the Retina
title_full_unstemmed A Simple and Accurate Model to Predict Responses to Multi-electrode Stimulation in the Retina
title_short A Simple and Accurate Model to Predict Responses to Multi-electrode Stimulation in the Retina
title_sort simple and accurate model to predict responses to multi-electrode stimulation in the retina
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4818105/
https://www.ncbi.nlm.nih.gov/pubmed/27035143
http://dx.doi.org/10.1371/journal.pcbi.1004849
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