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A Simple and Accurate Model to Predict Responses to Multi-electrode Stimulation in the Retina
Implantable electrode arrays are widely used in therapeutic stimulation of the nervous system (e.g. cochlear, retinal, and cortical implants). Currently, most neural prostheses use serial stimulation (i.e. one electrode at a time) despite this severely limiting the repertoire of stimuli that can be...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4818105/ https://www.ncbi.nlm.nih.gov/pubmed/27035143 http://dx.doi.org/10.1371/journal.pcbi.1004849 |
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author | Maturana, Matias I. Apollo, Nicholas V. Hadjinicolaou, Alex E. Garrett, David J. Cloherty, Shaun L. Kameneva, Tatiana Grayden, David B. Ibbotson, Michael R. Meffin, Hamish |
author_facet | Maturana, Matias I. Apollo, Nicholas V. Hadjinicolaou, Alex E. Garrett, David J. Cloherty, Shaun L. Kameneva, Tatiana Grayden, David B. Ibbotson, Michael R. Meffin, Hamish |
author_sort | Maturana, Matias I. |
collection | PubMed |
description | Implantable electrode arrays are widely used in therapeutic stimulation of the nervous system (e.g. cochlear, retinal, and cortical implants). Currently, most neural prostheses use serial stimulation (i.e. one electrode at a time) despite this severely limiting the repertoire of stimuli that can be applied. Methods to reliably predict the outcome of multi-electrode stimulation have not been available. Here, we demonstrate that a linear-nonlinear model accurately predicts neural responses to arbitrary patterns of stimulation using in vitro recordings from single retinal ganglion cells (RGCs) stimulated with a subretinal multi-electrode array. In the model, the stimulus is projected onto a low-dimensional subspace and then undergoes a nonlinear transformation to produce an estimate of spiking probability. The low-dimensional subspace is estimated using principal components analysis, which gives the neuron’s electrical receptive field (ERF), i.e. the electrodes to which the neuron is most sensitive. Our model suggests that stimulation proportional to the ERF yields a higher efficacy given a fixed amount of power when compared to equal amplitude stimulation on up to three electrodes. We find that the model captures the responses of all the cells recorded in the study, suggesting that it will generalize to most cell types in the retina. The model is computationally efficient to evaluate and, therefore, appropriate for future real-time applications including stimulation strategies that make use of recorded neural activity to improve the stimulation strategy. |
format | Online Article Text |
id | pubmed-4818105 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-48181052016-04-19 A Simple and Accurate Model to Predict Responses to Multi-electrode Stimulation in the Retina Maturana, Matias I. Apollo, Nicholas V. Hadjinicolaou, Alex E. Garrett, David J. Cloherty, Shaun L. Kameneva, Tatiana Grayden, David B. Ibbotson, Michael R. Meffin, Hamish PLoS Comput Biol Research Article Implantable electrode arrays are widely used in therapeutic stimulation of the nervous system (e.g. cochlear, retinal, and cortical implants). Currently, most neural prostheses use serial stimulation (i.e. one electrode at a time) despite this severely limiting the repertoire of stimuli that can be applied. Methods to reliably predict the outcome of multi-electrode stimulation have not been available. Here, we demonstrate that a linear-nonlinear model accurately predicts neural responses to arbitrary patterns of stimulation using in vitro recordings from single retinal ganglion cells (RGCs) stimulated with a subretinal multi-electrode array. In the model, the stimulus is projected onto a low-dimensional subspace and then undergoes a nonlinear transformation to produce an estimate of spiking probability. The low-dimensional subspace is estimated using principal components analysis, which gives the neuron’s electrical receptive field (ERF), i.e. the electrodes to which the neuron is most sensitive. Our model suggests that stimulation proportional to the ERF yields a higher efficacy given a fixed amount of power when compared to equal amplitude stimulation on up to three electrodes. We find that the model captures the responses of all the cells recorded in the study, suggesting that it will generalize to most cell types in the retina. The model is computationally efficient to evaluate and, therefore, appropriate for future real-time applications including stimulation strategies that make use of recorded neural activity to improve the stimulation strategy. Public Library of Science 2016-04-01 /pmc/articles/PMC4818105/ /pubmed/27035143 http://dx.doi.org/10.1371/journal.pcbi.1004849 Text en © 2016 Maturana et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Maturana, Matias I. Apollo, Nicholas V. Hadjinicolaou, Alex E. Garrett, David J. Cloherty, Shaun L. Kameneva, Tatiana Grayden, David B. Ibbotson, Michael R. Meffin, Hamish A Simple and Accurate Model to Predict Responses to Multi-electrode Stimulation in the Retina |
title | A Simple and Accurate Model to Predict Responses to Multi-electrode Stimulation in the Retina |
title_full | A Simple and Accurate Model to Predict Responses to Multi-electrode Stimulation in the Retina |
title_fullStr | A Simple and Accurate Model to Predict Responses to Multi-electrode Stimulation in the Retina |
title_full_unstemmed | A Simple and Accurate Model to Predict Responses to Multi-electrode Stimulation in the Retina |
title_short | A Simple and Accurate Model to Predict Responses to Multi-electrode Stimulation in the Retina |
title_sort | simple and accurate model to predict responses to multi-electrode stimulation in the retina |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4818105/ https://www.ncbi.nlm.nih.gov/pubmed/27035143 http://dx.doi.org/10.1371/journal.pcbi.1004849 |
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