High-quality genome sequencing and description of Dermabacter indicis sp. nov.

Strain FF11(T) was isolated from the wound on a researcher's finger who had been bitten by a fish (Protopterus annectens) in Senegal. Analysis by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry did not provide any identification, but the 16S rRNA sequence exhibited...

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Autores principales: Lo, C.I., Sankar, S.A., Ehounoud, C.B., Mediannikov, O., Labas, N., Caputo, A., Raoult, D., Fournier, P.-E., Fenollar, F.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2016
Materias:
Taxonogenomics: Genome of a New Organism
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4818346/
https://www.ncbi.nlm.nih.gov/pubmed/27081494
http://dx.doi.org/10.1016/j.nmni.2016.02.007
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author Lo, C.I.
Sankar, S.A.
Ehounoud, C.B.
Mediannikov, O.
Labas, N.
Caputo, A.
Raoult, D.
Fournier, P.-E.
Fenollar, F.
author_facet Lo, C.I.
Sankar, S.A.
Ehounoud, C.B.
Mediannikov, O.
Labas, N.
Caputo, A.
Raoult, D.
Fournier, P.-E.
Fenollar, F.
author_sort Lo, C.I.
collection PubMed
description Strain FF11(T) was isolated from the wound on a researcher's finger who had been bitten by a fish (Protopterus annectens) in Senegal. Analysis by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry did not provide any identification, but the 16S rRNA sequence exhibited 97.9% identity with Dermabacter hominis. Phenotypic and genomic analyses demonstrated that strain FF11(T) is Gram-positive, facultatively anaerobic, nonmotile and non–spore forming; it exhibited a genome of 2 222 902 bp encoding 2074 protein-coding and 50 RNA genes, with a 63.2% G+C content. We consequently proposed the creation of Dermabacter indicis strain FF11(T).
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spelling pubmed-48183462016-04-14 High-quality genome sequencing and description of Dermabacter indicis sp. nov. Lo, C.I. Sankar, S.A. Ehounoud, C.B. Mediannikov, O. Labas, N. Caputo, A. Raoult, D. Fournier, P.-E. Fenollar, F. New Microbes New Infect Taxonogenomics: Genome of a New Organism Strain FF11(T) was isolated from the wound on a researcher's finger who had been bitten by a fish (Protopterus annectens) in Senegal. Analysis by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry did not provide any identification, but the 16S rRNA sequence exhibited 97.9% identity with Dermabacter hominis. Phenotypic and genomic analyses demonstrated that strain FF11(T) is Gram-positive, facultatively anaerobic, nonmotile and non–spore forming; it exhibited a genome of 2 222 902 bp encoding 2074 protein-coding and 50 RNA genes, with a 63.2% G+C content. We consequently proposed the creation of Dermabacter indicis strain FF11(T). Elsevier 2016-02-23 /pmc/articles/PMC4818346/ /pubmed/27081494 http://dx.doi.org/10.1016/j.nmni.2016.02.007 Text en © 2016 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Taxonogenomics: Genome of a New Organism
Lo, C.I.
Sankar, S.A.
Ehounoud, C.B.
Mediannikov, O.
Labas, N.
Caputo, A.
Raoult, D.
Fournier, P.-E.
Fenollar, F.
High-quality genome sequencing and description of Dermabacter indicis sp. nov.
title High-quality genome sequencing and description of Dermabacter indicis sp. nov.
title_full High-quality genome sequencing and description of Dermabacter indicis sp. nov.
title_fullStr High-quality genome sequencing and description of Dermabacter indicis sp. nov.
title_full_unstemmed High-quality genome sequencing and description of Dermabacter indicis sp. nov.
title_short High-quality genome sequencing and description of Dermabacter indicis sp. nov.
title_sort high-quality genome sequencing and description of dermabacter indicis sp. nov.
topic Taxonogenomics: Genome of a New Organism
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4818346/
https://www.ncbi.nlm.nih.gov/pubmed/27081494
http://dx.doi.org/10.1016/j.nmni.2016.02.007
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