Cargando…

Comprehensive genome-wide evaluation of lapatinib-induced liver injury yields a single genetic signal centered on known risk allele HLA-DRB1*07:01

Lapatinib is associated with a low incidence of serious liver injury. Previous investigations have identified and confirmed the Class II allele HLA-DRB1*07:01 to be strongly associated with lapatinib-induced liver injury; however, the moderate positive predictive value limits its clinical utility. T...

Descripción completa

Detalles Bibliográficos
Autores principales: Parham, L R, Briley, L P, Li, L, Shen, J, Newcombe, P J, King, K S, Slater, A J, Dilthey, A, Iqbal, Z, McVean, G, Cox, C J, Nelson, M R, Spraggs, C F
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4819766/
https://www.ncbi.nlm.nih.gov/pubmed/25987243
http://dx.doi.org/10.1038/tpj.2015.40
_version_ 1782425278015864832
author Parham, L R
Briley, L P
Li, L
Shen, J
Newcombe, P J
King, K S
Slater, A J
Dilthey, A
Iqbal, Z
McVean, G
Cox, C J
Nelson, M R
Spraggs, C F
author_facet Parham, L R
Briley, L P
Li, L
Shen, J
Newcombe, P J
King, K S
Slater, A J
Dilthey, A
Iqbal, Z
McVean, G
Cox, C J
Nelson, M R
Spraggs, C F
author_sort Parham, L R
collection PubMed
description Lapatinib is associated with a low incidence of serious liver injury. Previous investigations have identified and confirmed the Class II allele HLA-DRB1*07:01 to be strongly associated with lapatinib-induced liver injury; however, the moderate positive predictive value limits its clinical utility. To assess whether additional genetic variants located within the major histocompatibility complex locus or elsewhere in the genome may influence lapatinib-induced liver injury risk, and potentially lead to a genetic association with improved predictive qualities, we have taken two approaches: a genome-wide association study and a whole-genome sequencing study. This evaluation did not reveal additional associations other than the previously identified association for HLA-DRB1*07:01. The present study represents the most comprehensive genetic evaluation of drug-induced liver injury (DILI) or hypersensitivity, and suggests that investigation of possible human leukocyte antigen associations with DILI and other hypersensitivities represents an important first step in understanding the mechanism of these events.
format Online
Article
Text
id pubmed-4819766
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Nature Publishing Group
record_format MEDLINE/PubMed
spelling pubmed-48197662016-04-17 Comprehensive genome-wide evaluation of lapatinib-induced liver injury yields a single genetic signal centered on known risk allele HLA-DRB1*07:01 Parham, L R Briley, L P Li, L Shen, J Newcombe, P J King, K S Slater, A J Dilthey, A Iqbal, Z McVean, G Cox, C J Nelson, M R Spraggs, C F Pharmacogenomics J Original Article Lapatinib is associated with a low incidence of serious liver injury. Previous investigations have identified and confirmed the Class II allele HLA-DRB1*07:01 to be strongly associated with lapatinib-induced liver injury; however, the moderate positive predictive value limits its clinical utility. To assess whether additional genetic variants located within the major histocompatibility complex locus or elsewhere in the genome may influence lapatinib-induced liver injury risk, and potentially lead to a genetic association with improved predictive qualities, we have taken two approaches: a genome-wide association study and a whole-genome sequencing study. This evaluation did not reveal additional associations other than the previously identified association for HLA-DRB1*07:01. The present study represents the most comprehensive genetic evaluation of drug-induced liver injury (DILI) or hypersensitivity, and suggests that investigation of possible human leukocyte antigen associations with DILI and other hypersensitivities represents an important first step in understanding the mechanism of these events. Nature Publishing Group 2016-04 2015-05-19 /pmc/articles/PMC4819766/ /pubmed/25987243 http://dx.doi.org/10.1038/tpj.2015.40 Text en Copyright © 2016 Macmillan Publishers Limited http://creativecommons.org/licenses/by-nc-nd/4.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/4.0/
spellingShingle Original Article
Parham, L R
Briley, L P
Li, L
Shen, J
Newcombe, P J
King, K S
Slater, A J
Dilthey, A
Iqbal, Z
McVean, G
Cox, C J
Nelson, M R
Spraggs, C F
Comprehensive genome-wide evaluation of lapatinib-induced liver injury yields a single genetic signal centered on known risk allele HLA-DRB1*07:01
title Comprehensive genome-wide evaluation of lapatinib-induced liver injury yields a single genetic signal centered on known risk allele HLA-DRB1*07:01
title_full Comprehensive genome-wide evaluation of lapatinib-induced liver injury yields a single genetic signal centered on known risk allele HLA-DRB1*07:01
title_fullStr Comprehensive genome-wide evaluation of lapatinib-induced liver injury yields a single genetic signal centered on known risk allele HLA-DRB1*07:01
title_full_unstemmed Comprehensive genome-wide evaluation of lapatinib-induced liver injury yields a single genetic signal centered on known risk allele HLA-DRB1*07:01
title_short Comprehensive genome-wide evaluation of lapatinib-induced liver injury yields a single genetic signal centered on known risk allele HLA-DRB1*07:01
title_sort comprehensive genome-wide evaluation of lapatinib-induced liver injury yields a single genetic signal centered on known risk allele hla-drb1*07:01
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4819766/
https://www.ncbi.nlm.nih.gov/pubmed/25987243
http://dx.doi.org/10.1038/tpj.2015.40
work_keys_str_mv AT parhamlr comprehensivegenomewideevaluationoflapatinibinducedliverinjuryyieldsasinglegeneticsignalcenteredonknownriskallelehladrb10701
AT brileylp comprehensivegenomewideevaluationoflapatinibinducedliverinjuryyieldsasinglegeneticsignalcenteredonknownriskallelehladrb10701
AT lil comprehensivegenomewideevaluationoflapatinibinducedliverinjuryyieldsasinglegeneticsignalcenteredonknownriskallelehladrb10701
AT shenj comprehensivegenomewideevaluationoflapatinibinducedliverinjuryyieldsasinglegeneticsignalcenteredonknownriskallelehladrb10701
AT newcombepj comprehensivegenomewideevaluationoflapatinibinducedliverinjuryyieldsasinglegeneticsignalcenteredonknownriskallelehladrb10701
AT kingks comprehensivegenomewideevaluationoflapatinibinducedliverinjuryyieldsasinglegeneticsignalcenteredonknownriskallelehladrb10701
AT slateraj comprehensivegenomewideevaluationoflapatinibinducedliverinjuryyieldsasinglegeneticsignalcenteredonknownriskallelehladrb10701
AT diltheya comprehensivegenomewideevaluationoflapatinibinducedliverinjuryyieldsasinglegeneticsignalcenteredonknownriskallelehladrb10701
AT iqbalz comprehensivegenomewideevaluationoflapatinibinducedliverinjuryyieldsasinglegeneticsignalcenteredonknownriskallelehladrb10701
AT mcveang comprehensivegenomewideevaluationoflapatinibinducedliverinjuryyieldsasinglegeneticsignalcenteredonknownriskallelehladrb10701
AT coxcj comprehensivegenomewideevaluationoflapatinibinducedliverinjuryyieldsasinglegeneticsignalcenteredonknownriskallelehladrb10701
AT nelsonmr comprehensivegenomewideevaluationoflapatinibinducedliverinjuryyieldsasinglegeneticsignalcenteredonknownriskallelehladrb10701
AT spraggscf comprehensivegenomewideevaluationoflapatinibinducedliverinjuryyieldsasinglegeneticsignalcenteredonknownriskallelehladrb10701