Cargando…

Loss of 5-Hydroxymethylcytosine Is an Independent Unfavorable Prognostic Factor for Esophageal Squamous Cell Carcinoma

Ten-eleven translocation (TET) enzymes catalyze the oxidation of 5-methylcytosine (5-mC) to 5-hydroxymethylcytosine (5-hmC), 5-formylcytosine and 5-carboxylcytosine, which result in genomic DNA demethylation. It was reported that 5-hmC levels were decreased in a variety of cancers and could be regar...

Descripción completa

Detalles Bibliográficos
Autores principales: Shi, Xuejiao, Yu, Yue, Luo, Mei, Zhang, Zhirong, Shi, Susheng, Feng, Xiaoli, Chen, Zhaoli, He, Jie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4822830/
https://www.ncbi.nlm.nih.gov/pubmed/27050164
http://dx.doi.org/10.1371/journal.pone.0153100
_version_ 1782425815921721344
author Shi, Xuejiao
Yu, Yue
Luo, Mei
Zhang, Zhirong
Shi, Susheng
Feng, Xiaoli
Chen, Zhaoli
He, Jie
author_facet Shi, Xuejiao
Yu, Yue
Luo, Mei
Zhang, Zhirong
Shi, Susheng
Feng, Xiaoli
Chen, Zhaoli
He, Jie
author_sort Shi, Xuejiao
collection PubMed
description Ten-eleven translocation (TET) enzymes catalyze the oxidation of 5-methylcytosine (5-mC) to 5-hydroxymethylcytosine (5-hmC), 5-formylcytosine and 5-carboxylcytosine, which result in genomic DNA demethylation. It was reported that 5-hmC levels were decreased in a variety of cancers and could be regarded as an epigenetic hallmark of cancer. In the present study, 5-hmC levels were detected by immunohistochemistry (IHC) in 173 esophageal squamous cell carcinoma (ESCC) tissues and 91 corresponding adjacent non-tumor tissues; DNA dot blot assays were used to detect the 5-hmC level in another 50 pairs of ESCC tissues and adjacent non-tumor tissues. In addition, the mRNA level of TET1, TET2 and TET3 in these 50 pairs of ESCC tissues was detected by real-time PCR. The IHC and DNA dot blot results showed that 5-hmC levels were significantly lower in ESCC tissues compared with corresponding adjacent non-tumor tissues (P = 0.029). TET2 and TET3 expression was also significantly decreased in tumor tissues compared with paired non-tumor tissues (TET2, P < 0.0001; TET3, P = 0.009), and the decrease in 5-hmC was significantly associated with the downregulation of TET2 expression (r = 0.405, P = 0.004). Moreover, the loss of 5-hmC in ESCC tissues was significantly associated with poor overall survival among patients with ESCC (P = 0.043); multivariate Cox regression analysis showed that the loss of 5-hmC in ESCC tissues was an independent unfavorable prognostic indicator for patients with ESCC (HR = 1.569, P = 0.029). In conclusion, 5-hmC levels were decreased in ESCC tissues, and the loss of 5-hmC in tumor tissues was an independent unfavorable prognostic factor for patients with ESCC.
format Online
Article
Text
id pubmed-4822830
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-48228302016-04-22 Loss of 5-Hydroxymethylcytosine Is an Independent Unfavorable Prognostic Factor for Esophageal Squamous Cell Carcinoma Shi, Xuejiao Yu, Yue Luo, Mei Zhang, Zhirong Shi, Susheng Feng, Xiaoli Chen, Zhaoli He, Jie PLoS One Research Article Ten-eleven translocation (TET) enzymes catalyze the oxidation of 5-methylcytosine (5-mC) to 5-hydroxymethylcytosine (5-hmC), 5-formylcytosine and 5-carboxylcytosine, which result in genomic DNA demethylation. It was reported that 5-hmC levels were decreased in a variety of cancers and could be regarded as an epigenetic hallmark of cancer. In the present study, 5-hmC levels were detected by immunohistochemistry (IHC) in 173 esophageal squamous cell carcinoma (ESCC) tissues and 91 corresponding adjacent non-tumor tissues; DNA dot blot assays were used to detect the 5-hmC level in another 50 pairs of ESCC tissues and adjacent non-tumor tissues. In addition, the mRNA level of TET1, TET2 and TET3 in these 50 pairs of ESCC tissues was detected by real-time PCR. The IHC and DNA dot blot results showed that 5-hmC levels were significantly lower in ESCC tissues compared with corresponding adjacent non-tumor tissues (P = 0.029). TET2 and TET3 expression was also significantly decreased in tumor tissues compared with paired non-tumor tissues (TET2, P < 0.0001; TET3, P = 0.009), and the decrease in 5-hmC was significantly associated with the downregulation of TET2 expression (r = 0.405, P = 0.004). Moreover, the loss of 5-hmC in ESCC tissues was significantly associated with poor overall survival among patients with ESCC (P = 0.043); multivariate Cox regression analysis showed that the loss of 5-hmC in ESCC tissues was an independent unfavorable prognostic indicator for patients with ESCC (HR = 1.569, P = 0.029). In conclusion, 5-hmC levels were decreased in ESCC tissues, and the loss of 5-hmC in tumor tissues was an independent unfavorable prognostic factor for patients with ESCC. Public Library of Science 2016-04-06 /pmc/articles/PMC4822830/ /pubmed/27050164 http://dx.doi.org/10.1371/journal.pone.0153100 Text en © 2016 Shi et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Shi, Xuejiao
Yu, Yue
Luo, Mei
Zhang, Zhirong
Shi, Susheng
Feng, Xiaoli
Chen, Zhaoli
He, Jie
Loss of 5-Hydroxymethylcytosine Is an Independent Unfavorable Prognostic Factor for Esophageal Squamous Cell Carcinoma
title Loss of 5-Hydroxymethylcytosine Is an Independent Unfavorable Prognostic Factor for Esophageal Squamous Cell Carcinoma
title_full Loss of 5-Hydroxymethylcytosine Is an Independent Unfavorable Prognostic Factor for Esophageal Squamous Cell Carcinoma
title_fullStr Loss of 5-Hydroxymethylcytosine Is an Independent Unfavorable Prognostic Factor for Esophageal Squamous Cell Carcinoma
title_full_unstemmed Loss of 5-Hydroxymethylcytosine Is an Independent Unfavorable Prognostic Factor for Esophageal Squamous Cell Carcinoma
title_short Loss of 5-Hydroxymethylcytosine Is an Independent Unfavorable Prognostic Factor for Esophageal Squamous Cell Carcinoma
title_sort loss of 5-hydroxymethylcytosine is an independent unfavorable prognostic factor for esophageal squamous cell carcinoma
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4822830/
https://www.ncbi.nlm.nih.gov/pubmed/27050164
http://dx.doi.org/10.1371/journal.pone.0153100
work_keys_str_mv AT shixuejiao lossof5hydroxymethylcytosineisanindependentunfavorableprognosticfactorforesophagealsquamouscellcarcinoma
AT yuyue lossof5hydroxymethylcytosineisanindependentunfavorableprognosticfactorforesophagealsquamouscellcarcinoma
AT luomei lossof5hydroxymethylcytosineisanindependentunfavorableprognosticfactorforesophagealsquamouscellcarcinoma
AT zhangzhirong lossof5hydroxymethylcytosineisanindependentunfavorableprognosticfactorforesophagealsquamouscellcarcinoma
AT shisusheng lossof5hydroxymethylcytosineisanindependentunfavorableprognosticfactorforesophagealsquamouscellcarcinoma
AT fengxiaoli lossof5hydroxymethylcytosineisanindependentunfavorableprognosticfactorforesophagealsquamouscellcarcinoma
AT chenzhaoli lossof5hydroxymethylcytosineisanindependentunfavorableprognosticfactorforesophagealsquamouscellcarcinoma
AT hejie lossof5hydroxymethylcytosineisanindependentunfavorableprognosticfactorforesophagealsquamouscellcarcinoma