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Transporting Ocean Viromes: Invasion of the Aquatic Biosphere

Studies of marine viromes (viral metagenomes) have revealed that DNA viruses are highly diverse and exhibit biogeographic patterns. However, little is known about the diversity of RNA viruses, which are mostly composed of eukaryotic viruses, and their biogeographic patterns in the oceans. A growth i...

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Detalles Bibliográficos
Autores principales: Kim, Yiseul, Aw, Tiong Gim, Rose, Joan B.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4824483/
https://www.ncbi.nlm.nih.gov/pubmed/27055282
http://dx.doi.org/10.1371/journal.pone.0152671
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author Kim, Yiseul
Aw, Tiong Gim
Rose, Joan B.
author_facet Kim, Yiseul
Aw, Tiong Gim
Rose, Joan B.
author_sort Kim, Yiseul
collection PubMed
description Studies of marine viromes (viral metagenomes) have revealed that DNA viruses are highly diverse and exhibit biogeographic patterns. However, little is known about the diversity of RNA viruses, which are mostly composed of eukaryotic viruses, and their biogeographic patterns in the oceans. A growth in global commerce and maritime traffic may accelerate spread of diverse and non-cosmopolitan DNA viruses and potentially RNA viruses from one part of the world to another. Here, we demonstrated through metagenomic analyses that failure to comply with mid-ocean ballast water exchange regulation could result in movement of viromes including both DNA viruses and RNA viruses (including potential viral pathogens) unique to geographic and environmental niches. Furthermore, our results showed that virus richness (known and unknown viruses) in ballast water is associated with distance between ballast water exchange location and its nearest shoreline as well as length of water storage time in ballast tanks (voyage duration). However, richness of only known viruses is governed by local environmental conditions and different viral groups have different responses to environmental variation. Overall, these results identified ballast water as a factor contributing to ocean virome transport and potentially increased exposure of the aquatic bioshpere to viral invasion.
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spelling pubmed-48244832016-04-22 Transporting Ocean Viromes: Invasion of the Aquatic Biosphere Kim, Yiseul Aw, Tiong Gim Rose, Joan B. PLoS One Research Article Studies of marine viromes (viral metagenomes) have revealed that DNA viruses are highly diverse and exhibit biogeographic patterns. However, little is known about the diversity of RNA viruses, which are mostly composed of eukaryotic viruses, and their biogeographic patterns in the oceans. A growth in global commerce and maritime traffic may accelerate spread of diverse and non-cosmopolitan DNA viruses and potentially RNA viruses from one part of the world to another. Here, we demonstrated through metagenomic analyses that failure to comply with mid-ocean ballast water exchange regulation could result in movement of viromes including both DNA viruses and RNA viruses (including potential viral pathogens) unique to geographic and environmental niches. Furthermore, our results showed that virus richness (known and unknown viruses) in ballast water is associated with distance between ballast water exchange location and its nearest shoreline as well as length of water storage time in ballast tanks (voyage duration). However, richness of only known viruses is governed by local environmental conditions and different viral groups have different responses to environmental variation. Overall, these results identified ballast water as a factor contributing to ocean virome transport and potentially increased exposure of the aquatic bioshpere to viral invasion. Public Library of Science 2016-04-07 /pmc/articles/PMC4824483/ /pubmed/27055282 http://dx.doi.org/10.1371/journal.pone.0152671 Text en © 2016 Kim et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Kim, Yiseul
Aw, Tiong Gim
Rose, Joan B.
Transporting Ocean Viromes: Invasion of the Aquatic Biosphere
title Transporting Ocean Viromes: Invasion of the Aquatic Biosphere
title_full Transporting Ocean Viromes: Invasion of the Aquatic Biosphere
title_fullStr Transporting Ocean Viromes: Invasion of the Aquatic Biosphere
title_full_unstemmed Transporting Ocean Viromes: Invasion of the Aquatic Biosphere
title_short Transporting Ocean Viromes: Invasion of the Aquatic Biosphere
title_sort transporting ocean viromes: invasion of the aquatic biosphere
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4824483/
https://www.ncbi.nlm.nih.gov/pubmed/27055282
http://dx.doi.org/10.1371/journal.pone.0152671
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