Cargando…

Amino acid recognition for automatic resonance assignment of intrinsically disordered proteins

Resonance assignment is a prerequisite for almost any NMR-based study of proteins. It can be very challenging in some cases, however, due to the nature of the protein under investigation. This is the case with intrinsically disordered proteins, for example, whose NMR spectra suffer from low chemical...

Descripción completa

Detalles Bibliográficos
Autores principales:	Piai, Alessandro, Gonnelli, Leonardo, Felli, Isabella C., Pierattelli, Roberta, Kazimierczuk, Krzysztof, Grudziąż, Katarzyna, Koźmiński, Wiktor, Zawadzka-Kazimierczuk, Anna
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Springer Netherlands 2016
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4824835/ https://www.ncbi.nlm.nih.gov/pubmed/26891900 http://dx.doi.org/10.1007/s10858-016-0024-2

Ejemplares similares

(13)C-detected NMR experiments for automatic resonance assignment of IDPs and multiple-fixing SMFT processing
por: Dziekański, Paweł, et al.
Publicado: (2015)

High dimensional and high resolution pulse sequences for backbone resonance assignment of intrinsically disordered proteins
por: Zawadzka-Kazimierczuk, Anna, et al.
Publicado: (2012)

(1)H, (13)C and (15)N resonance assignments of human BASP1
por: Geist, Leonhard, et al.
Publicado: (2012)

Strategy for complete NMR assignment of disordered proteins with highly repetitive sequences based on resolution-enhanced 5D experiments
por: Motáčková, Veronika, et al.
Publicado: (2010)

(1)H, (15)N, (13)C resonance assignment of human GAP-43
por: Flamm, Andrea Gabriele, et al.
Publicado: (2016)

Linear discriminant analysis reveals hidden patterns in NMR chemical shifts of intrinsically disordered proteins
por: Romero, Javier A., et al.
Publicado: (2022)

Joint non-uniform sampling of all incremented time delays for quicker acquisition in protein relaxation studies
por: Urbańczyk, Mateusz, et al.
Publicado: (2017)

Mechanism of Atg9 recruitment by Atg11 in the cytoplasm-to-vacuole targeting pathway
por: Coudevylle, Nicolas, et al.
Publicado: (2022)

Fast 2D NMR Spectroscopy for In vivo Monitoring of Bacterial Metabolism in Complex Mixtures
por: Dass, Rupashree, et al.
Publicado: (2017)

Six- and seven-dimensional experiments by combination of sparse random sampling and projection spectroscopy dedicated for backbone resonance assignment of intrinsically disordered proteins
por: Żerko, Szymon, et al.
Publicado: (2015)

Exclusively heteronuclear NMR experiments for the investigation of intrinsically disordered proteins: focusing on proline residues
por: Felli, Isabella C., et al.
Publicado: (2021)

A novel high-dimensional NMR experiment for resolving protein backbone dihedral angle ambiguities
por: Kauffmann, Clemens, et al.
Publicado: (2020)

The highly flexible disordered regions of the SARS-CoV-2 nucleocapsid N protein within the 1–248 residue construct: sequence-specific resonance assignments through NMR
por: Schiavina, Marco, et al.
Publicado: (2021)

Correction: X-ray wavefunction refinement and comprehensive structural studies on bromo-substituted analogues of 2-deoxy-d-glucose in solid state and solution
por: Ziemniak, Marcin, et al.
Publicado: (2022)

Linking functions: an additional role for an intrinsically disordered linker domain in the transcriptional coactivator CBP
por: Contreras-Martos, Sara, et al.
Publicado: (2017)

Experimental and Computational Studies on Structure and Energetic Properties of Halogen Derivatives of 2-Deoxy-D-Glucose
por: Ziemniak, Marcin, et al.
Publicado: (2021)

(13)C Direct Detected NMR for Challenging Systems
por: Felli, Isabella C., et al.
Publicado: (2022)

Five and four dimensional experiments for robust backbone resonance assignment of large intrinsically disordered proteins: application to Tau3x protein
por: Żerko, Szymon, et al.
Publicado: (2016)

NMR Reveals Specific Tracts within the Intrinsically Disordered Regions of the SARS-CoV-2 Nucleocapsid Protein Involved in RNA Encountering
por: Pontoriero, Letizia, et al.
Publicado: (2022)

(1)H, (15)N, (13)C resonance assignment of human osteopontin
por: Platzer, Gerald, et al.
Publicado: (2015)

Interaction patterns of methoprene-tolerant and germ cell-expressed Drosophila JH receptors suggest significant differences in their functioning
por: Kolonko-Adamska, M., et al.
Publicado: (2023)

Enhanced Nuclear Magnetic Resonance Spectroscopy with Isotropic Mixing as a Pseudodimension
por: Gołowicz, Dariusz, et al.
Publicado: (2022)

Ensemble description of the intrinsically disordered N-terminal domain of the Nipah virus P/V protein from combined NMR and SAXS
por: Schiavina, Marco, et al.
Publicado: (2020)

Using Cross‐Correlated Spin Relaxation to Characterize Backbone Dihedral Angle Distributions of Flexible Protein Segments
por: Kauffmann, Clemens, et al.
Publicado: (2020)

Adenoviral E1A Exploits Flexibility and Disorder to Target Cellular Proteins
por: Murrali, Maria Grazia, et al.
Publicado: (2020)

(1)H, (13)C and (15)N backbone resonance assignment of BRCA1 fragment 219–504
por: Górka, Michał, et al.
Publicado: (2020)

Modified OMP Algorithm for Exponentially Decaying Signals
por: Kazimierczuk, Krzysztof, et al.
Publicado: (2014)

Resonant power converters
por: Kazimierczuk, Marian K, et al.
Publicado: (2012)

Interaction between the scaffold proteins CBP by IQGAP1 provides an interface between gene expression and cytoskeletal activity
por: Kosol, Simone, et al.
Publicado: (2020)

Enhancing Compression Level for More Efficient Compressed Sensing and Other Lessons from NMR Spectroscopy
por: Gołowicz, Dariusz, et al.
Publicado: (2020)

Clustered sparsity and Poisson-gap sampling
por: Kasprzak, Paweł, et al.
Publicado: (2021)

RF power amplifiers
por: Kazimierczuk, Marian
Publicado: (2015)

Correction: (19)F multiple-quantum coherence NMR spectroscopy for probing protein–ligand interactions
por: Zawadzka-Kazimierczuk, Anna, et al.
Publicado: (2019)

(19)F multiple-quantum coherence NMR spectroscopy for probing protein–ligand interactions
por: Zawadzka-Kazimierczuk, Anna, et al.
Publicado: (2018)

The Role of Disordered Regions in Orchestrating the Properties of Multidomain Proteins: The SARS-CoV-2 Nucleocapsid Protein and Its Interaction with Enoxaparin
por: Schiavina, Marco, et al.
Publicado: (2022)

(1)H, (13)C, and (15)N backbone and side chain resonance assignments of the C-terminal DNA binding and dimerization domain of v-Myc
por: Kızılsavaş, Gönül, et al.
Publicado: (2012)

High resolution 4D HPCH experiment for sequential assignment of (13)C-labeled RNAs via phosphodiester backbone
por: Saxena, Saurabh, et al.
Publicado: (2015)

Pulse-width modulated DC-DC power converters
por: Kazimierczuk, Marian K
Publicado: (2015)

Pulse-width modulated DC-DC power converters
por: Kazimierczuk, Marian K
Publicado: (2008)

High-frequency magnetic components
por: Kazimierczuk, Marian K
Publicado: (2009)

Cannot write session to /tmp/vufind_sessions/sess_r3aim7o0hv1bk2fcnmnjrik5ct