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Mass Spectrometry Imaging and Identification of Peptides Associated with Cephalic Ganglia Regeneration in Schmidtea mediterranea
Tissue regeneration is a complex process that involves a mosaic of molecules that vary spatially and temporally. Insights into the chemical signaling underlying this process can be achieved with a multiplex and untargeted chemical imaging method such as mass spectrometry imaging (MSI), which can ena...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Society for Biochemistry and Molecular Biology
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4825013/ https://www.ncbi.nlm.nih.gov/pubmed/26884331 http://dx.doi.org/10.1074/jbc.M115.709196 |
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author | Ong, Ta-Hsuan Romanova, Elena V. Roberts-Galbraith, Rachel H. Yang, Ning Zimmerman, Tyler A. Collins, James J. Lee, Ji Eun Kelleher, Neil L. Newmark, Phillip A. Sweedler, Jonathan V. |
author_facet | Ong, Ta-Hsuan Romanova, Elena V. Roberts-Galbraith, Rachel H. Yang, Ning Zimmerman, Tyler A. Collins, James J. Lee, Ji Eun Kelleher, Neil L. Newmark, Phillip A. Sweedler, Jonathan V. |
author_sort | Ong, Ta-Hsuan |
collection | PubMed |
description | Tissue regeneration is a complex process that involves a mosaic of molecules that vary spatially and temporally. Insights into the chemical signaling underlying this process can be achieved with a multiplex and untargeted chemical imaging method such as mass spectrometry imaging (MSI), which can enable de novo studies of nervous system regeneration. A combination of MSI and multivariate statistics was used to differentiate peptide dynamics in the freshwater planarian flatworm Schmidtea mediterranea at different time points during cephalic ganglia regeneration. A protocol was developed to make S. mediterranea tissues amenable for MSI. MS ion images of planarian tissue sections allow changes in peptides and unknown compounds to be followed as a function of cephalic ganglia regeneration. In conjunction with fluorescence imaging, our results suggest that even though the cephalic ganglia structure is visible after 6 days of regeneration, the original chemical composition of these regenerated structures is regained only after 12 days. Differences were observed in many peptides, such as those derived from secreted peptide 4 and EYE53-1. Peptidomic analysis further identified multiple peptides from various known prohormones, histone proteins, and DNA- and RNA-binding proteins as being associated with the regeneration process. Mass spectrometry data also facilitated the identification of a new prohormone, which we have named secreted peptide prohormone 20 (SPP-20), and is up-regulated during regeneration in planarians. |
format | Online Article Text |
id | pubmed-4825013 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | American Society for Biochemistry and Molecular Biology |
record_format | MEDLINE/PubMed |
spelling | pubmed-48250132016-04-21 Mass Spectrometry Imaging and Identification of Peptides Associated with Cephalic Ganglia Regeneration in Schmidtea mediterranea Ong, Ta-Hsuan Romanova, Elena V. Roberts-Galbraith, Rachel H. Yang, Ning Zimmerman, Tyler A. Collins, James J. Lee, Ji Eun Kelleher, Neil L. Newmark, Phillip A. Sweedler, Jonathan V. J Biol Chem Genomics and Proteomics Tissue regeneration is a complex process that involves a mosaic of molecules that vary spatially and temporally. Insights into the chemical signaling underlying this process can be achieved with a multiplex and untargeted chemical imaging method such as mass spectrometry imaging (MSI), which can enable de novo studies of nervous system regeneration. A combination of MSI and multivariate statistics was used to differentiate peptide dynamics in the freshwater planarian flatworm Schmidtea mediterranea at different time points during cephalic ganglia regeneration. A protocol was developed to make S. mediterranea tissues amenable for MSI. MS ion images of planarian tissue sections allow changes in peptides and unknown compounds to be followed as a function of cephalic ganglia regeneration. In conjunction with fluorescence imaging, our results suggest that even though the cephalic ganglia structure is visible after 6 days of regeneration, the original chemical composition of these regenerated structures is regained only after 12 days. Differences were observed in many peptides, such as those derived from secreted peptide 4 and EYE53-1. Peptidomic analysis further identified multiple peptides from various known prohormones, histone proteins, and DNA- and RNA-binding proteins as being associated with the regeneration process. Mass spectrometry data also facilitated the identification of a new prohormone, which we have named secreted peptide prohormone 20 (SPP-20), and is up-regulated during regeneration in planarians. American Society for Biochemistry and Molecular Biology 2016-04-08 2016-02-16 /pmc/articles/PMC4825013/ /pubmed/26884331 http://dx.doi.org/10.1074/jbc.M115.709196 Text en © 2016 by The American Society for Biochemistry and Molecular Biology, Inc. Author's Choice—Final version free via Creative Commons CC-BY license (http://creativecommons.org/licenses/by/4.0) . |
spellingShingle | Genomics and Proteomics Ong, Ta-Hsuan Romanova, Elena V. Roberts-Galbraith, Rachel H. Yang, Ning Zimmerman, Tyler A. Collins, James J. Lee, Ji Eun Kelleher, Neil L. Newmark, Phillip A. Sweedler, Jonathan V. Mass Spectrometry Imaging and Identification of Peptides Associated with Cephalic Ganglia Regeneration in Schmidtea mediterranea |
title | Mass Spectrometry Imaging and Identification of Peptides Associated with Cephalic Ganglia Regeneration in Schmidtea mediterranea |
title_full | Mass Spectrometry Imaging and Identification of Peptides Associated with Cephalic Ganglia Regeneration in Schmidtea mediterranea |
title_fullStr | Mass Spectrometry Imaging and Identification of Peptides Associated with Cephalic Ganglia Regeneration in Schmidtea mediterranea |
title_full_unstemmed | Mass Spectrometry Imaging and Identification of Peptides Associated with Cephalic Ganglia Regeneration in Schmidtea mediterranea |
title_short | Mass Spectrometry Imaging and Identification of Peptides Associated with Cephalic Ganglia Regeneration in Schmidtea mediterranea |
title_sort | mass spectrometry imaging and identification of peptides associated with cephalic ganglia regeneration in schmidtea mediterranea |
topic | Genomics and Proteomics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4825013/ https://www.ncbi.nlm.nih.gov/pubmed/26884331 http://dx.doi.org/10.1074/jbc.M115.709196 |
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