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Rapid Quantitative Pharmacodynamic Imaging with Bayesian Estimation
We recently described rapid quantitative pharmacodynamic imaging, a novel method for estimating sensitivity of a biological system to a drug. We tested its accuracy in simulated biological signals with varying receptor sensitivity and varying levels of random noise, and presented initial proof-of-co...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4825616/ https://www.ncbi.nlm.nih.gov/pubmed/27092045 http://dx.doi.org/10.3389/fnins.2016.00144 |
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author | Koller, Jonathan M. Vachon, M. Jonathan Bretthorst, G. Larry Black, Kevin J. |
author_facet | Koller, Jonathan M. Vachon, M. Jonathan Bretthorst, G. Larry Black, Kevin J. |
author_sort | Koller, Jonathan M. |
collection | PubMed |
description | We recently described rapid quantitative pharmacodynamic imaging, a novel method for estimating sensitivity of a biological system to a drug. We tested its accuracy in simulated biological signals with varying receptor sensitivity and varying levels of random noise, and presented initial proof-of-concept data from functional MRI (fMRI) studies in primate brain. However, the initial simulation testing used a simple iterative approach to estimate pharmacokinetic-pharmacodynamic (PKPD) parameters, an approach that was computationally efficient but returned parameters only from a small, discrete set of values chosen a priori. Here we revisit the simulation testing using a Bayesian method to estimate the PKPD parameters. This improved accuracy compared to our previous method, and noise without intentional signal was never interpreted as signal. We also reanalyze the fMRI proof-of-concept data. The success with the simulated data, and with the limited fMRI data, is a necessary first step toward further testing of rapid quantitative pharmacodynamic imaging. |
format | Online Article Text |
id | pubmed-4825616 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-48256162016-04-18 Rapid Quantitative Pharmacodynamic Imaging with Bayesian Estimation Koller, Jonathan M. Vachon, M. Jonathan Bretthorst, G. Larry Black, Kevin J. Front Neurosci Neuroscience We recently described rapid quantitative pharmacodynamic imaging, a novel method for estimating sensitivity of a biological system to a drug. We tested its accuracy in simulated biological signals with varying receptor sensitivity and varying levels of random noise, and presented initial proof-of-concept data from functional MRI (fMRI) studies in primate brain. However, the initial simulation testing used a simple iterative approach to estimate pharmacokinetic-pharmacodynamic (PKPD) parameters, an approach that was computationally efficient but returned parameters only from a small, discrete set of values chosen a priori. Here we revisit the simulation testing using a Bayesian method to estimate the PKPD parameters. This improved accuracy compared to our previous method, and noise without intentional signal was never interpreted as signal. We also reanalyze the fMRI proof-of-concept data. The success with the simulated data, and with the limited fMRI data, is a necessary first step toward further testing of rapid quantitative pharmacodynamic imaging. Frontiers Media S.A. 2016-04-08 /pmc/articles/PMC4825616/ /pubmed/27092045 http://dx.doi.org/10.3389/fnins.2016.00144 Text en Copyright © 2016 Koller, Vachon, Bretthorst and Black. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Koller, Jonathan M. Vachon, M. Jonathan Bretthorst, G. Larry Black, Kevin J. Rapid Quantitative Pharmacodynamic Imaging with Bayesian Estimation |
title | Rapid Quantitative Pharmacodynamic Imaging with Bayesian Estimation |
title_full | Rapid Quantitative Pharmacodynamic Imaging with Bayesian Estimation |
title_fullStr | Rapid Quantitative Pharmacodynamic Imaging with Bayesian Estimation |
title_full_unstemmed | Rapid Quantitative Pharmacodynamic Imaging with Bayesian Estimation |
title_short | Rapid Quantitative Pharmacodynamic Imaging with Bayesian Estimation |
title_sort | rapid quantitative pharmacodynamic imaging with bayesian estimation |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4825616/ https://www.ncbi.nlm.nih.gov/pubmed/27092045 http://dx.doi.org/10.3389/fnins.2016.00144 |
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