Comparative Analysis of Begonia Plastid Genomes and Their Utility for Species-Level Phylogenetics

Recent, rapid radiations make species-level phylogenetics difficult to resolve. We used a multiplexed, high-throughput sequencing approach to identify informative genomic regions to resolve phylogenetic relationships at low taxonomic levels in Begonia from a survey of sixteen species. A long-range P...

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Detalles Bibliográficos
Autores principales: Harrison, Nicola, Harrison, Richard J., Kidner, Catherine A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4825977/
https://www.ncbi.nlm.nih.gov/pubmed/27058864
http://dx.doi.org/10.1371/journal.pone.0153248
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author Harrison, Nicola
Harrison, Richard J.
Kidner, Catherine A.
author_facet Harrison, Nicola
Harrison, Richard J.
Kidner, Catherine A.
author_sort Harrison, Nicola
collection PubMed
description Recent, rapid radiations make species-level phylogenetics difficult to resolve. We used a multiplexed, high-throughput sequencing approach to identify informative genomic regions to resolve phylogenetic relationships at low taxonomic levels in Begonia from a survey of sixteen species. A long-range PCR method was used to generate draft plastid genomes to provide a strong phylogenetic backbone, identify fast evolving regions and provide informative molecular markers for species-level phylogenetic studies in Begonia.
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spelling pubmed-48259772016-04-22 Comparative Analysis of Begonia Plastid Genomes and Their Utility for Species-Level Phylogenetics Harrison, Nicola Harrison, Richard J. Kidner, Catherine A. PLoS One Research Article Recent, rapid radiations make species-level phylogenetics difficult to resolve. We used a multiplexed, high-throughput sequencing approach to identify informative genomic regions to resolve phylogenetic relationships at low taxonomic levels in Begonia from a survey of sixteen species. A long-range PCR method was used to generate draft plastid genomes to provide a strong phylogenetic backbone, identify fast evolving regions and provide informative molecular markers for species-level phylogenetic studies in Begonia. Public Library of Science 2016-04-08 /pmc/articles/PMC4825977/ /pubmed/27058864 http://dx.doi.org/10.1371/journal.pone.0153248 Text en © 2016 Harrison et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Harrison, Nicola
Harrison, Richard J.
Kidner, Catherine A.
Comparative Analysis of Begonia Plastid Genomes and Their Utility for Species-Level Phylogenetics
title Comparative Analysis of Begonia Plastid Genomes and Their Utility for Species-Level Phylogenetics
title_full Comparative Analysis of Begonia Plastid Genomes and Their Utility for Species-Level Phylogenetics
title_fullStr Comparative Analysis of Begonia Plastid Genomes and Their Utility for Species-Level Phylogenetics
title_full_unstemmed Comparative Analysis of Begonia Plastid Genomes and Their Utility for Species-Level Phylogenetics
title_short Comparative Analysis of Begonia Plastid Genomes and Their Utility for Species-Level Phylogenetics
title_sort comparative analysis of begonia plastid genomes and their utility for species-level phylogenetics
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4825977/
https://www.ncbi.nlm.nih.gov/pubmed/27058864
http://dx.doi.org/10.1371/journal.pone.0153248
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