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The aminoacyl-tRNA synthetases of Drosophila melanogaster

Aminoacyl-tRNA synthetases (aaRSs) ligate amino acids to their cognate tRNAs, allowing them to decode the triplet code during translation. Through different mechanisms aaRSs also perform several non-canonical functions in transcription, translation, apoptosis, angiogenesis and inflammation. Drosophi...

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Detalles Bibliográficos
Autores principales: Lu, Jiongming, Marygold, Steven J, Gharib, Walid H, Suter, Beat
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4826098/
https://www.ncbi.nlm.nih.gov/pubmed/26761199
http://dx.doi.org/10.1080/19336934.2015.1101196
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author Lu, Jiongming
Marygold, Steven J
Gharib, Walid H
Suter, Beat
author_facet Lu, Jiongming
Marygold, Steven J
Gharib, Walid H
Suter, Beat
author_sort Lu, Jiongming
collection PubMed
description Aminoacyl-tRNA synthetases (aaRSs) ligate amino acids to their cognate tRNAs, allowing them to decode the triplet code during translation. Through different mechanisms aaRSs also perform several non-canonical functions in transcription, translation, apoptosis, angiogenesis and inflammation. Drosophila has become a preferred system to model human diseases caused by mutations in aaRS genes, to dissect effects of reduced translation or non-canonical activities, and to study aminoacylation and translational fidelity. However, the lack of a systematic annotation of this gene family has hampered such studies. Here, we report the identification of the entire set of aaRS genes in the fly genome and we predict their roles based on experimental evidence and/or orthology. Further, we propose a new, systematic and logical nomenclature for aaRSs. We also review the research conducted on Drosophila aaRSs to date. Together, our work provides the foundation for further research in the fly aaRS field.
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spelling pubmed-48260982016-04-27 The aminoacyl-tRNA synthetases of Drosophila melanogaster Lu, Jiongming Marygold, Steven J Gharib, Walid H Suter, Beat Fly (Austin) Review Aminoacyl-tRNA synthetases (aaRSs) ligate amino acids to their cognate tRNAs, allowing them to decode the triplet code during translation. Through different mechanisms aaRSs also perform several non-canonical functions in transcription, translation, apoptosis, angiogenesis and inflammation. Drosophila has become a preferred system to model human diseases caused by mutations in aaRS genes, to dissect effects of reduced translation or non-canonical activities, and to study aminoacylation and translational fidelity. However, the lack of a systematic annotation of this gene family has hampered such studies. Here, we report the identification of the entire set of aaRS genes in the fly genome and we predict their roles based on experimental evidence and/or orthology. Further, we propose a new, systematic and logical nomenclature for aaRSs. We also review the research conducted on Drosophila aaRSs to date. Together, our work provides the foundation for further research in the fly aaRS field. Taylor & Francis 2016-01-13 /pmc/articles/PMC4826098/ /pubmed/26761199 http://dx.doi.org/10.1080/19336934.2015.1101196 Text en © 2015 The Author(s). Published with license by Taylor & Francis Group, LLC http://creativecommons.org/licenses/by/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. The moral rights of the named author(s) have been asserted.
spellingShingle Review
Lu, Jiongming
Marygold, Steven J
Gharib, Walid H
Suter, Beat
The aminoacyl-tRNA synthetases of Drosophila melanogaster
title The aminoacyl-tRNA synthetases of Drosophila melanogaster
title_full The aminoacyl-tRNA synthetases of Drosophila melanogaster
title_fullStr The aminoacyl-tRNA synthetases of Drosophila melanogaster
title_full_unstemmed The aminoacyl-tRNA synthetases of Drosophila melanogaster
title_short The aminoacyl-tRNA synthetases of Drosophila melanogaster
title_sort aminoacyl-trna synthetases of drosophila melanogaster
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4826098/
https://www.ncbi.nlm.nih.gov/pubmed/26761199
http://dx.doi.org/10.1080/19336934.2015.1101196
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