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A Stochastic Individual-Based Model of the Progression of Atrial Fibrillation in Individuals and Populations
Models that represent the mechanisms that initiate and sustain atrial fibrillation (AF) in the heart are computationally expensive to simulate and therefore only capture short time scales of a few heart beats. It is therefore difficult to embed biophysical mechanisms into both policy-level disease m...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4829251/ https://www.ncbi.nlm.nih.gov/pubmed/27070920 http://dx.doi.org/10.1371/journal.pone.0152349 |
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author | Chang, Eugene T. Y. Lin, Yen Ting Galla, Tobias Clayton, Richard H. Eatock, Julie |
author_facet | Chang, Eugene T. Y. Lin, Yen Ting Galla, Tobias Clayton, Richard H. Eatock, Julie |
author_sort | Chang, Eugene T. Y. |
collection | PubMed |
description | Models that represent the mechanisms that initiate and sustain atrial fibrillation (AF) in the heart are computationally expensive to simulate and therefore only capture short time scales of a few heart beats. It is therefore difficult to embed biophysical mechanisms into both policy-level disease models, which consider populations of patients over multiple decades, and guidelines that recommend treatment strategies for patients. The aim of this study is to link these modelling paradigms using a stylised population-level model that both represents AF progression over a long time-scale and retains a description of biophysical mechanisms. We develop a non-Markovian binary switching model incorporating three different aspects of AF progression: genetic disposition, disease/age related remodelling, and AF-related remodelling. This approach allows us to simulate individual AF episodes as well as the natural progression of AF in patients over a period of decades. Model parameters are derived, where possible, from the literature, and the model development has highlighted a need for quantitative data that describe the progression of AF in population of patients. The model produces time series data of AF episodes over the lifetimes of simulated patients. These are analysed to quantitatively describe progression of AF in terms of several underlying parameters. Overall, the model has potential to link mechanisms of AF to progression, and to be used as a tool to study clinical markers of AF or as training data for AF classification algorithms. |
format | Online Article Text |
id | pubmed-4829251 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-48292512016-04-22 A Stochastic Individual-Based Model of the Progression of Atrial Fibrillation in Individuals and Populations Chang, Eugene T. Y. Lin, Yen Ting Galla, Tobias Clayton, Richard H. Eatock, Julie PLoS One Research Article Models that represent the mechanisms that initiate and sustain atrial fibrillation (AF) in the heart are computationally expensive to simulate and therefore only capture short time scales of a few heart beats. It is therefore difficult to embed biophysical mechanisms into both policy-level disease models, which consider populations of patients over multiple decades, and guidelines that recommend treatment strategies for patients. The aim of this study is to link these modelling paradigms using a stylised population-level model that both represents AF progression over a long time-scale and retains a description of biophysical mechanisms. We develop a non-Markovian binary switching model incorporating three different aspects of AF progression: genetic disposition, disease/age related remodelling, and AF-related remodelling. This approach allows us to simulate individual AF episodes as well as the natural progression of AF in patients over a period of decades. Model parameters are derived, where possible, from the literature, and the model development has highlighted a need for quantitative data that describe the progression of AF in population of patients. The model produces time series data of AF episodes over the lifetimes of simulated patients. These are analysed to quantitatively describe progression of AF in terms of several underlying parameters. Overall, the model has potential to link mechanisms of AF to progression, and to be used as a tool to study clinical markers of AF or as training data for AF classification algorithms. Public Library of Science 2016-04-12 /pmc/articles/PMC4829251/ /pubmed/27070920 http://dx.doi.org/10.1371/journal.pone.0152349 Text en © 2016 Chang et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Chang, Eugene T. Y. Lin, Yen Ting Galla, Tobias Clayton, Richard H. Eatock, Julie A Stochastic Individual-Based Model of the Progression of Atrial Fibrillation in Individuals and Populations |
title | A Stochastic Individual-Based Model of the Progression of Atrial Fibrillation in Individuals and Populations |
title_full | A Stochastic Individual-Based Model of the Progression of Atrial Fibrillation in Individuals and Populations |
title_fullStr | A Stochastic Individual-Based Model of the Progression of Atrial Fibrillation in Individuals and Populations |
title_full_unstemmed | A Stochastic Individual-Based Model of the Progression of Atrial Fibrillation in Individuals and Populations |
title_short | A Stochastic Individual-Based Model of the Progression of Atrial Fibrillation in Individuals and Populations |
title_sort | stochastic individual-based model of the progression of atrial fibrillation in individuals and populations |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4829251/ https://www.ncbi.nlm.nih.gov/pubmed/27070920 http://dx.doi.org/10.1371/journal.pone.0152349 |
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