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Paraphyletic genus Ditylenchus Filipjev (Nematoda, Tylenchida), corresponding to the D. triformis-group and the D. dipsaci-group scheme
Abstract. The genus Ditylenchus has been divided into 2 groups: the Ditylenchus triformis-group, and the Ditylenchus dipsaci-group based on morphological and biological characters. A total of 18 populations belong to 5 species of Ditylenchus was studied: Ditylenchus africanus, Ditylenchus destructor...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Pensoft Publishers
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4829666/ https://www.ncbi.nlm.nih.gov/pubmed/27103870 http://dx.doi.org/10.3897/zookeys.568.5965 |
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author | Qiao, Yuejing Yu, Qing Badiss, Ahmed Zaidi, Mohsin A. Ekaterina Ponomareva, Hu, Yuegao Ye, Weimin |
author_facet | Qiao, Yuejing Yu, Qing Badiss, Ahmed Zaidi, Mohsin A. Ekaterina Ponomareva, Hu, Yuegao Ye, Weimin |
author_sort | Qiao, Yuejing |
collection | PubMed |
description | Abstract. The genus Ditylenchus has been divided into 2 groups: the Ditylenchus triformis-group, and the Ditylenchus dipsaci-group based on morphological and biological characters. A total of 18 populations belong to 5 species of Ditylenchus was studied: Ditylenchus africanus, Ditylenchus destructor, Ditylenchus myceliophagus and dipsaci, Ditylenchus weischeri, the first 3 belong to the Ditylenchus triformis-group, the last 2 the Ditylenchus dipsaci-group. The species of Ditylenchus triformis-group were cultured on fungi, while the species from Ditylenchus dispaci-group cultured on excised roots of plant hosts in petri dish. DNA sequences of regions of the nuclear ribosomal (ITS1) and the small subunit 18S were PCR amplified, sequenced and the phylogenetic analyses also including the sequences of the closely related species from the GenBank. The randomly amplified polymorphisms of genomic DNA (RAPD) were also generated. Two clusters or clades corresponding to the 2 groups were consistently observed with significant statistical support from the 3 datasets. The phylogenetic analysis also revealed that the genus is paraphyletic, separating the 2 groups by species of Anguina and Subanguina. |
format | Online Article Text |
id | pubmed-4829666 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Pensoft Publishers |
record_format | MEDLINE/PubMed |
spelling | pubmed-48296662016-04-21 Paraphyletic genus Ditylenchus Filipjev (Nematoda, Tylenchida), corresponding to the D. triformis-group and the D. dipsaci-group scheme Qiao, Yuejing Yu, Qing Badiss, Ahmed Zaidi, Mohsin A. Ekaterina Ponomareva, Hu, Yuegao Ye, Weimin Zookeys Research Article Abstract. The genus Ditylenchus has been divided into 2 groups: the Ditylenchus triformis-group, and the Ditylenchus dipsaci-group based on morphological and biological characters. A total of 18 populations belong to 5 species of Ditylenchus was studied: Ditylenchus africanus, Ditylenchus destructor, Ditylenchus myceliophagus and dipsaci, Ditylenchus weischeri, the first 3 belong to the Ditylenchus triformis-group, the last 2 the Ditylenchus dipsaci-group. The species of Ditylenchus triformis-group were cultured on fungi, while the species from Ditylenchus dispaci-group cultured on excised roots of plant hosts in petri dish. DNA sequences of regions of the nuclear ribosomal (ITS1) and the small subunit 18S were PCR amplified, sequenced and the phylogenetic analyses also including the sequences of the closely related species from the GenBank. The randomly amplified polymorphisms of genomic DNA (RAPD) were also generated. Two clusters or clades corresponding to the 2 groups were consistently observed with significant statistical support from the 3 datasets. The phylogenetic analysis also revealed that the genus is paraphyletic, separating the 2 groups by species of Anguina and Subanguina. Pensoft Publishers 2016-02-23 /pmc/articles/PMC4829666/ /pubmed/27103870 http://dx.doi.org/10.3897/zookeys.568.5965 Text en Yuejing Qiao, Qing Yu, Ahmed Badiss, Mohsin A. Zaidi, Ekaterina Ponomareva, Yuegao Hu, Weimin Ye http://creativecommons.org/licenses/by/4.0 This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Qiao, Yuejing Yu, Qing Badiss, Ahmed Zaidi, Mohsin A. Ekaterina Ponomareva, Hu, Yuegao Ye, Weimin Paraphyletic genus Ditylenchus Filipjev (Nematoda, Tylenchida), corresponding to the D. triformis-group and the D. dipsaci-group scheme |
title | Paraphyletic genus Ditylenchus Filipjev (Nematoda, Tylenchida), corresponding to the D.
triformis-group and the D.
dipsaci-group scheme |
title_full | Paraphyletic genus Ditylenchus Filipjev (Nematoda, Tylenchida), corresponding to the D.
triformis-group and the D.
dipsaci-group scheme |
title_fullStr | Paraphyletic genus Ditylenchus Filipjev (Nematoda, Tylenchida), corresponding to the D.
triformis-group and the D.
dipsaci-group scheme |
title_full_unstemmed | Paraphyletic genus Ditylenchus Filipjev (Nematoda, Tylenchida), corresponding to the D.
triformis-group and the D.
dipsaci-group scheme |
title_short | Paraphyletic genus Ditylenchus Filipjev (Nematoda, Tylenchida), corresponding to the D.
triformis-group and the D.
dipsaci-group scheme |
title_sort | paraphyletic genus ditylenchus filipjev (nematoda, tylenchida), corresponding to the d.
triformis-group and the d.
dipsaci-group scheme |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4829666/ https://www.ncbi.nlm.nih.gov/pubmed/27103870 http://dx.doi.org/10.3897/zookeys.568.5965 |
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