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Paraphyletic genus Ditylenchus Filipjev (Nematoda, Tylenchida), corresponding to the D. triformis-group and the D. dipsaci-group scheme

Abstract. The genus Ditylenchus has been divided into 2 groups: the Ditylenchus triformis-group, and the Ditylenchus dipsaci-group based on morphological and biological characters. A total of 18 populations belong to 5 species of Ditylenchus was studied: Ditylenchus africanus, Ditylenchus destructor...

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Autores principales: Qiao, Yuejing, Yu, Qing, Badiss, Ahmed, Zaidi, Mohsin A., Ekaterina Ponomareva, Hu, Yuegao, Ye, Weimin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Pensoft Publishers 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4829666/
https://www.ncbi.nlm.nih.gov/pubmed/27103870
http://dx.doi.org/10.3897/zookeys.568.5965
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author Qiao, Yuejing
Yu, Qing
Badiss, Ahmed
Zaidi, Mohsin A.
Ekaterina Ponomareva,
Hu, Yuegao
Ye, Weimin
author_facet Qiao, Yuejing
Yu, Qing
Badiss, Ahmed
Zaidi, Mohsin A.
Ekaterina Ponomareva,
Hu, Yuegao
Ye, Weimin
author_sort Qiao, Yuejing
collection PubMed
description Abstract. The genus Ditylenchus has been divided into 2 groups: the Ditylenchus triformis-group, and the Ditylenchus dipsaci-group based on morphological and biological characters. A total of 18 populations belong to 5 species of Ditylenchus was studied: Ditylenchus africanus, Ditylenchus destructor, Ditylenchus myceliophagus and dipsaci, Ditylenchus weischeri, the first 3 belong to the Ditylenchus triformis-group, the last 2 the Ditylenchus dipsaci-group. The species of Ditylenchus triformis-group were cultured on fungi, while the species from Ditylenchus dispaci-group cultured on excised roots of plant hosts in petri dish. DNA sequences of regions of the nuclear ribosomal (ITS1) and the small subunit 18S were PCR amplified, sequenced and the phylogenetic analyses also including the sequences of the closely related species from the GenBank. The randomly amplified polymorphisms of genomic DNA (RAPD) were also generated. Two clusters or clades corresponding to the 2 groups were consistently observed with significant statistical support from the 3 datasets. The phylogenetic analysis also revealed that the genus is paraphyletic, separating the 2 groups by species of Anguina and Subanguina.
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spelling pubmed-48296662016-04-21 Paraphyletic genus Ditylenchus Filipjev (Nematoda, Tylenchida), corresponding to the D. triformis-group and the D. dipsaci-group scheme Qiao, Yuejing Yu, Qing Badiss, Ahmed Zaidi, Mohsin A. Ekaterina Ponomareva, Hu, Yuegao Ye, Weimin Zookeys Research Article Abstract. The genus Ditylenchus has been divided into 2 groups: the Ditylenchus triformis-group, and the Ditylenchus dipsaci-group based on morphological and biological characters. A total of 18 populations belong to 5 species of Ditylenchus was studied: Ditylenchus africanus, Ditylenchus destructor, Ditylenchus myceliophagus and dipsaci, Ditylenchus weischeri, the first 3 belong to the Ditylenchus triformis-group, the last 2 the Ditylenchus dipsaci-group. The species of Ditylenchus triformis-group were cultured on fungi, while the species from Ditylenchus dispaci-group cultured on excised roots of plant hosts in petri dish. DNA sequences of regions of the nuclear ribosomal (ITS1) and the small subunit 18S were PCR amplified, sequenced and the phylogenetic analyses also including the sequences of the closely related species from the GenBank. The randomly amplified polymorphisms of genomic DNA (RAPD) were also generated. Two clusters or clades corresponding to the 2 groups were consistently observed with significant statistical support from the 3 datasets. The phylogenetic analysis also revealed that the genus is paraphyletic, separating the 2 groups by species of Anguina and Subanguina. Pensoft Publishers 2016-02-23 /pmc/articles/PMC4829666/ /pubmed/27103870 http://dx.doi.org/10.3897/zookeys.568.5965 Text en Yuejing Qiao, Qing Yu, Ahmed Badiss, Mohsin A. Zaidi, Ekaterina Ponomareva, Yuegao Hu, Weimin Ye http://creativecommons.org/licenses/by/4.0 This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Qiao, Yuejing
Yu, Qing
Badiss, Ahmed
Zaidi, Mohsin A.
Ekaterina Ponomareva,
Hu, Yuegao
Ye, Weimin
Paraphyletic genus Ditylenchus Filipjev (Nematoda, Tylenchida), corresponding to the D. triformis-group and the D. dipsaci-group scheme
title Paraphyletic genus Ditylenchus Filipjev (Nematoda, Tylenchida), corresponding to the D. triformis-group and the D. dipsaci-group scheme
title_full Paraphyletic genus Ditylenchus Filipjev (Nematoda, Tylenchida), corresponding to the D. triformis-group and the D. dipsaci-group scheme
title_fullStr Paraphyletic genus Ditylenchus Filipjev (Nematoda, Tylenchida), corresponding to the D. triformis-group and the D. dipsaci-group scheme
title_full_unstemmed Paraphyletic genus Ditylenchus Filipjev (Nematoda, Tylenchida), corresponding to the D. triformis-group and the D. dipsaci-group scheme
title_short Paraphyletic genus Ditylenchus Filipjev (Nematoda, Tylenchida), corresponding to the D. triformis-group and the D. dipsaci-group scheme
title_sort paraphyletic genus ditylenchus filipjev (nematoda, tylenchida), corresponding to the d. triformis-group and the d. dipsaci-group scheme
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4829666/
https://www.ncbi.nlm.nih.gov/pubmed/27103870
http://dx.doi.org/10.3897/zookeys.568.5965
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