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Draft genome sequence of Psychrobacter sp. ENNN9_III, a strain isolated from water in a polluted temperate estuarine system (Ria de Aveiro, Portugal)
The genus Psychrobacter includes Gram-negative coccobacilli that are non-pigmented, oxidase-positive, non-motile, psychrophilic or psychrotolerant, and halotolerant. Psychrobacter strain ENNN9_III was isolated from water in a polluted temperate estuarine system, contaminated with hydrocarbons and he...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Elsevier
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4832037/ https://www.ncbi.nlm.nih.gov/pubmed/27114904 http://dx.doi.org/10.1016/j.gdata.2016.02.013 |
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author | Gomes, Jaqueline Conceição Meireles Azevedo, Juliana Simão Nina de Veras, Adonney Allan de Oliveira Alves, Jorianne Thyeska Castro Henriques, Isabel Correia, António Silva, Artur Luiz da Costa da Carneiro, Adriana Ribeiro |
author_facet | Gomes, Jaqueline Conceição Meireles Azevedo, Juliana Simão Nina de Veras, Adonney Allan de Oliveira Alves, Jorianne Thyeska Castro Henriques, Isabel Correia, António Silva, Artur Luiz da Costa da Carneiro, Adriana Ribeiro |
author_sort | Gomes, Jaqueline Conceição Meireles |
collection | PubMed |
description | The genus Psychrobacter includes Gram-negative coccobacilli that are non-pigmented, oxidase-positive, non-motile, psychrophilic or psychrotolerant, and halotolerant. Psychrobacter strain ENNN9_III was isolated from water in a polluted temperate estuarine system, contaminated with hydrocarbons and heavy metals. The genome has a G + C content of 42.7%, 2618 open reading frames (ORFs), three copies of the rRNAs operon, and 29 tRNA genes. Twenty-five sequences related to the degradation of aromatic compounds were predicted, as well as numerous genes related to resistance to metals or metal(loid)s. The genome sequence of Psychrobacter strain ENNN9_III provides the groundwork for further elucidation of the mechanisms of metal resistance and aromatic compounds degradation. Future studies are needed to confirm the usefulness of this strain for bioremediation proposes. |
format | Online Article Text |
id | pubmed-4832037 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-48320372016-04-25 Draft genome sequence of Psychrobacter sp. ENNN9_III, a strain isolated from water in a polluted temperate estuarine system (Ria de Aveiro, Portugal) Gomes, Jaqueline Conceição Meireles Azevedo, Juliana Simão Nina de Veras, Adonney Allan de Oliveira Alves, Jorianne Thyeska Castro Henriques, Isabel Correia, António Silva, Artur Luiz da Costa da Carneiro, Adriana Ribeiro Genom Data Regular Article The genus Psychrobacter includes Gram-negative coccobacilli that are non-pigmented, oxidase-positive, non-motile, psychrophilic or psychrotolerant, and halotolerant. Psychrobacter strain ENNN9_III was isolated from water in a polluted temperate estuarine system, contaminated with hydrocarbons and heavy metals. The genome has a G + C content of 42.7%, 2618 open reading frames (ORFs), three copies of the rRNAs operon, and 29 tRNA genes. Twenty-five sequences related to the degradation of aromatic compounds were predicted, as well as numerous genes related to resistance to metals or metal(loid)s. The genome sequence of Psychrobacter strain ENNN9_III provides the groundwork for further elucidation of the mechanisms of metal resistance and aromatic compounds degradation. Future studies are needed to confirm the usefulness of this strain for bioremediation proposes. Elsevier 2016-02-23 /pmc/articles/PMC4832037/ /pubmed/27114904 http://dx.doi.org/10.1016/j.gdata.2016.02.013 Text en © 2016 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Regular Article Gomes, Jaqueline Conceição Meireles Azevedo, Juliana Simão Nina de Veras, Adonney Allan de Oliveira Alves, Jorianne Thyeska Castro Henriques, Isabel Correia, António Silva, Artur Luiz da Costa da Carneiro, Adriana Ribeiro Draft genome sequence of Psychrobacter sp. ENNN9_III, a strain isolated from water in a polluted temperate estuarine system (Ria de Aveiro, Portugal) |
title | Draft genome sequence of Psychrobacter sp. ENNN9_III, a strain isolated from water in a polluted temperate estuarine system (Ria de Aveiro, Portugal) |
title_full | Draft genome sequence of Psychrobacter sp. ENNN9_III, a strain isolated from water in a polluted temperate estuarine system (Ria de Aveiro, Portugal) |
title_fullStr | Draft genome sequence of Psychrobacter sp. ENNN9_III, a strain isolated from water in a polluted temperate estuarine system (Ria de Aveiro, Portugal) |
title_full_unstemmed | Draft genome sequence of Psychrobacter sp. ENNN9_III, a strain isolated from water in a polluted temperate estuarine system (Ria de Aveiro, Portugal) |
title_short | Draft genome sequence of Psychrobacter sp. ENNN9_III, a strain isolated from water in a polluted temperate estuarine system (Ria de Aveiro, Portugal) |
title_sort | draft genome sequence of psychrobacter sp. ennn9_iii, a strain isolated from water in a polluted temperate estuarine system (ria de aveiro, portugal) |
topic | Regular Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4832037/ https://www.ncbi.nlm.nih.gov/pubmed/27114904 http://dx.doi.org/10.1016/j.gdata.2016.02.013 |
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