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Draft genome sequence of Psychrobacter sp. ENNN9_III, a strain isolated from water in a polluted temperate estuarine system (Ria de Aveiro, Portugal)

The genus Psychrobacter includes Gram-negative coccobacilli that are non-pigmented, oxidase-positive, non-motile, psychrophilic or psychrotolerant, and halotolerant. Psychrobacter strain ENNN9_III was isolated from water in a polluted temperate estuarine system, contaminated with hydrocarbons and he...

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Autores principales: Gomes, Jaqueline Conceição Meireles, Azevedo, Juliana Simão Nina de, Veras, Adonney Allan de Oliveira, Alves, Jorianne Thyeska Castro, Henriques, Isabel, Correia, António, Silva, Artur Luiz da Costa da, Carneiro, Adriana Ribeiro
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4832037/
https://www.ncbi.nlm.nih.gov/pubmed/27114904
http://dx.doi.org/10.1016/j.gdata.2016.02.013
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author Gomes, Jaqueline Conceição Meireles
Azevedo, Juliana Simão Nina de
Veras, Adonney Allan de Oliveira
Alves, Jorianne Thyeska Castro
Henriques, Isabel
Correia, António
Silva, Artur Luiz da Costa da
Carneiro, Adriana Ribeiro
author_facet Gomes, Jaqueline Conceição Meireles
Azevedo, Juliana Simão Nina de
Veras, Adonney Allan de Oliveira
Alves, Jorianne Thyeska Castro
Henriques, Isabel
Correia, António
Silva, Artur Luiz da Costa da
Carneiro, Adriana Ribeiro
author_sort Gomes, Jaqueline Conceição Meireles
collection PubMed
description The genus Psychrobacter includes Gram-negative coccobacilli that are non-pigmented, oxidase-positive, non-motile, psychrophilic or psychrotolerant, and halotolerant. Psychrobacter strain ENNN9_III was isolated from water in a polluted temperate estuarine system, contaminated with hydrocarbons and heavy metals. The genome has a G + C content of 42.7%, 2618 open reading frames (ORFs), three copies of the rRNAs operon, and 29 tRNA genes. Twenty-five sequences related to the degradation of aromatic compounds were predicted, as well as numerous genes related to resistance to metals or metal(loid)s. The genome sequence of Psychrobacter strain ENNN9_III provides the groundwork for further elucidation of the mechanisms of metal resistance and aromatic compounds degradation. Future studies are needed to confirm the usefulness of this strain for bioremediation proposes.
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spelling pubmed-48320372016-04-25 Draft genome sequence of Psychrobacter sp. ENNN9_III, a strain isolated from water in a polluted temperate estuarine system (Ria de Aveiro, Portugal) Gomes, Jaqueline Conceição Meireles Azevedo, Juliana Simão Nina de Veras, Adonney Allan de Oliveira Alves, Jorianne Thyeska Castro Henriques, Isabel Correia, António Silva, Artur Luiz da Costa da Carneiro, Adriana Ribeiro Genom Data Regular Article The genus Psychrobacter includes Gram-negative coccobacilli that are non-pigmented, oxidase-positive, non-motile, psychrophilic or psychrotolerant, and halotolerant. Psychrobacter strain ENNN9_III was isolated from water in a polluted temperate estuarine system, contaminated with hydrocarbons and heavy metals. The genome has a G + C content of 42.7%, 2618 open reading frames (ORFs), three copies of the rRNAs operon, and 29 tRNA genes. Twenty-five sequences related to the degradation of aromatic compounds were predicted, as well as numerous genes related to resistance to metals or metal(loid)s. The genome sequence of Psychrobacter strain ENNN9_III provides the groundwork for further elucidation of the mechanisms of metal resistance and aromatic compounds degradation. Future studies are needed to confirm the usefulness of this strain for bioremediation proposes. Elsevier 2016-02-23 /pmc/articles/PMC4832037/ /pubmed/27114904 http://dx.doi.org/10.1016/j.gdata.2016.02.013 Text en © 2016 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Regular Article
Gomes, Jaqueline Conceição Meireles
Azevedo, Juliana Simão Nina de
Veras, Adonney Allan de Oliveira
Alves, Jorianne Thyeska Castro
Henriques, Isabel
Correia, António
Silva, Artur Luiz da Costa da
Carneiro, Adriana Ribeiro
Draft genome sequence of Psychrobacter sp. ENNN9_III, a strain isolated from water in a polluted temperate estuarine system (Ria de Aveiro, Portugal)
title Draft genome sequence of Psychrobacter sp. ENNN9_III, a strain isolated from water in a polluted temperate estuarine system (Ria de Aveiro, Portugal)
title_full Draft genome sequence of Psychrobacter sp. ENNN9_III, a strain isolated from water in a polluted temperate estuarine system (Ria de Aveiro, Portugal)
title_fullStr Draft genome sequence of Psychrobacter sp. ENNN9_III, a strain isolated from water in a polluted temperate estuarine system (Ria de Aveiro, Portugal)
title_full_unstemmed Draft genome sequence of Psychrobacter sp. ENNN9_III, a strain isolated from water in a polluted temperate estuarine system (Ria de Aveiro, Portugal)
title_short Draft genome sequence of Psychrobacter sp. ENNN9_III, a strain isolated from water in a polluted temperate estuarine system (Ria de Aveiro, Portugal)
title_sort draft genome sequence of psychrobacter sp. ennn9_iii, a strain isolated from water in a polluted temperate estuarine system (ria de aveiro, portugal)
topic Regular Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4832037/
https://www.ncbi.nlm.nih.gov/pubmed/27114904
http://dx.doi.org/10.1016/j.gdata.2016.02.013
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