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Automated image analysis in the study of collagenous colitis
PURPOSE: The aim of this study was to develop an automated image analysis software to measure the thickness of the subepithelial collagenous band in colon biopsies with collagenous colitis (CC) and incomplete CC (CCi). The software measures the thickness of the collagenous band on microscopic slides...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Dove Medical Press
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4833367/ https://www.ncbi.nlm.nih.gov/pubmed/27114713 http://dx.doi.org/10.2147/CEG.S101219 |
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author | Fiehn, Anne-Marie Kanstrup Kristensson, Martin Engel, Ulla Munck, Lars Kristian Holck, Susanne Engel, Peter Johan Heiberg |
author_facet | Fiehn, Anne-Marie Kanstrup Kristensson, Martin Engel, Ulla Munck, Lars Kristian Holck, Susanne Engel, Peter Johan Heiberg |
author_sort | Fiehn, Anne-Marie Kanstrup |
collection | PubMed |
description | PURPOSE: The aim of this study was to develop an automated image analysis software to measure the thickness of the subepithelial collagenous band in colon biopsies with collagenous colitis (CC) and incomplete CC (CCi). The software measures the thickness of the collagenous band on microscopic slides stained with Van Gieson (VG). PATIENTS AND METHODS: A training set consisting of ten biopsies diagnosed as CC, CCi, and normal colon mucosa was used to develop the automated image analysis (VG app) to match the assessment by a pathologist. The study set consisted of biopsies from 75 patients. Twenty-five cases were primarily diagnosed as CC, 25 as CCi, and 25 as normal or near-normal colonic mucosa. Four pathologists individually reassessed the biopsies and categorized all into one of the abovementioned three categories. The result of the VG app was correlated with the diagnosis provided by the four pathologists. RESULTS: The interobserver agreement for each pair of pathologists ranged from κ-values of 0.56–0.81, while the κ-value for the VG app vs each of the pathologists varied from 0.63 to 0.79. The overall agreement between the four pathologists was κ=0.69, while the overall agreement between the four pathologists and the VG app was κ=0.71. CONCLUSION: In conclusion, the Visiopharm VG app is able to measure the thickness of a sub-epithelial collagenous band in colon biopsies with an accuracy comparable to the performance of a pathologist and thereby provides a promising supplementary tool for the diagnosis of CC and CCi and in particular for research. |
format | Online Article Text |
id | pubmed-4833367 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Dove Medical Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-48333672016-04-25 Automated image analysis in the study of collagenous colitis Fiehn, Anne-Marie Kanstrup Kristensson, Martin Engel, Ulla Munck, Lars Kristian Holck, Susanne Engel, Peter Johan Heiberg Clin Exp Gastroenterol Methodology PURPOSE: The aim of this study was to develop an automated image analysis software to measure the thickness of the subepithelial collagenous band in colon biopsies with collagenous colitis (CC) and incomplete CC (CCi). The software measures the thickness of the collagenous band on microscopic slides stained with Van Gieson (VG). PATIENTS AND METHODS: A training set consisting of ten biopsies diagnosed as CC, CCi, and normal colon mucosa was used to develop the automated image analysis (VG app) to match the assessment by a pathologist. The study set consisted of biopsies from 75 patients. Twenty-five cases were primarily diagnosed as CC, 25 as CCi, and 25 as normal or near-normal colonic mucosa. Four pathologists individually reassessed the biopsies and categorized all into one of the abovementioned three categories. The result of the VG app was correlated with the diagnosis provided by the four pathologists. RESULTS: The interobserver agreement for each pair of pathologists ranged from κ-values of 0.56–0.81, while the κ-value for the VG app vs each of the pathologists varied from 0.63 to 0.79. The overall agreement between the four pathologists was κ=0.69, while the overall agreement between the four pathologists and the VG app was κ=0.71. CONCLUSION: In conclusion, the Visiopharm VG app is able to measure the thickness of a sub-epithelial collagenous band in colon biopsies with an accuracy comparable to the performance of a pathologist and thereby provides a promising supplementary tool for the diagnosis of CC and CCi and in particular for research. Dove Medical Press 2016-04-08 /pmc/articles/PMC4833367/ /pubmed/27114713 http://dx.doi.org/10.2147/CEG.S101219 Text en © 2016 Fiehn et al. This work is published and licensed by Dove Medical Press Limited The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. |
spellingShingle | Methodology Fiehn, Anne-Marie Kanstrup Kristensson, Martin Engel, Ulla Munck, Lars Kristian Holck, Susanne Engel, Peter Johan Heiberg Automated image analysis in the study of collagenous colitis |
title | Automated image analysis in the study of collagenous colitis |
title_full | Automated image analysis in the study of collagenous colitis |
title_fullStr | Automated image analysis in the study of collagenous colitis |
title_full_unstemmed | Automated image analysis in the study of collagenous colitis |
title_short | Automated image analysis in the study of collagenous colitis |
title_sort | automated image analysis in the study of collagenous colitis |
topic | Methodology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4833367/ https://www.ncbi.nlm.nih.gov/pubmed/27114713 http://dx.doi.org/10.2147/CEG.S101219 |
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