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The Biokinetic Spectrum for Temperature
We identify and describe the distribution of temperature-dependent specific growth rates for life on Earth, which we term the biokinetic spectrum for temperature. The spectrum has the potential to provide for more robust modeling in thermal ecology since any conclusions derived from it will be based...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4835062/ https://www.ncbi.nlm.nih.gov/pubmed/27088362 http://dx.doi.org/10.1371/journal.pone.0153343 |
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author | Corkrey, Ross McMeekin, Tom A. Bowman, John P. Ratkowsky, David A. Olley, June Ross, Tom |
author_facet | Corkrey, Ross McMeekin, Tom A. Bowman, John P. Ratkowsky, David A. Olley, June Ross, Tom |
author_sort | Corkrey, Ross |
collection | PubMed |
description | We identify and describe the distribution of temperature-dependent specific growth rates for life on Earth, which we term the biokinetic spectrum for temperature. The spectrum has the potential to provide for more robust modeling in thermal ecology since any conclusions derived from it will be based on observed data rather than using theoretical assumptions. It may also provide constraints for systems biology model predictions and provide insights in physiology. The spectrum has a Δ-shape with a sharp peak at around 42°C. At higher temperatures up to 60°C there was a gap of attenuated growth rates. We found another peak at 67°C and a steady decline in maximum rates thereafter. By using Bayesian quantile regression to summarise and explore the data we were able to conclude that the gap represented an actual biological transition between mesophiles and thermophiles that we term the Mesophile-Thermophile Gap (MTG). We have not identified any organism that grows above the maximum rate of the spectrum. We used a thermodynamic model to recover the Δ-shape, suggesting that the growth rate limits arise from a trade-off between activity and stability of proteins. The spectrum provides underpinning principles that will find utility in models concerned with the thermal responses of biological processes. |
format | Online Article Text |
id | pubmed-4835062 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-48350622016-04-29 The Biokinetic Spectrum for Temperature Corkrey, Ross McMeekin, Tom A. Bowman, John P. Ratkowsky, David A. Olley, June Ross, Tom PLoS One Research Article We identify and describe the distribution of temperature-dependent specific growth rates for life on Earth, which we term the biokinetic spectrum for temperature. The spectrum has the potential to provide for more robust modeling in thermal ecology since any conclusions derived from it will be based on observed data rather than using theoretical assumptions. It may also provide constraints for systems biology model predictions and provide insights in physiology. The spectrum has a Δ-shape with a sharp peak at around 42°C. At higher temperatures up to 60°C there was a gap of attenuated growth rates. We found another peak at 67°C and a steady decline in maximum rates thereafter. By using Bayesian quantile regression to summarise and explore the data we were able to conclude that the gap represented an actual biological transition between mesophiles and thermophiles that we term the Mesophile-Thermophile Gap (MTG). We have not identified any organism that grows above the maximum rate of the spectrum. We used a thermodynamic model to recover the Δ-shape, suggesting that the growth rate limits arise from a trade-off between activity and stability of proteins. The spectrum provides underpinning principles that will find utility in models concerned with the thermal responses of biological processes. Public Library of Science 2016-04-18 /pmc/articles/PMC4835062/ /pubmed/27088362 http://dx.doi.org/10.1371/journal.pone.0153343 Text en © 2016 Corkrey et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Corkrey, Ross McMeekin, Tom A. Bowman, John P. Ratkowsky, David A. Olley, June Ross, Tom The Biokinetic Spectrum for Temperature |
title | The Biokinetic Spectrum for Temperature |
title_full | The Biokinetic Spectrum for Temperature |
title_fullStr | The Biokinetic Spectrum for Temperature |
title_full_unstemmed | The Biokinetic Spectrum for Temperature |
title_short | The Biokinetic Spectrum for Temperature |
title_sort | biokinetic spectrum for temperature |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4835062/ https://www.ncbi.nlm.nih.gov/pubmed/27088362 http://dx.doi.org/10.1371/journal.pone.0153343 |
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