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Reverse Transcription Cross-Priming Amplification–Nucleic Acid Test Strip for Rapid Detection of Porcine Epidemic Diarrhea Virus

Porcine epidemic diarrhea virus (PEDV) is a highly transmissible coronavirus that causes a severe enteric disease particularly in neonatal piglets. In this study, a rapid method for detecting PEDV was developed based on cross-priming amplification and nucleic acid test strip(CPA-NATS). Five primers...

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Autores principales: Wang, Feng-Xue, Yuan, Dan-Yi, Jin, Ya-Nan, Hu, Lin, Sun, Zhi-Yong, He, Qian, Zhao, Shi-Hua, Zhan, Shu-Bai, Wen, Yong-Jun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4835727/
https://www.ncbi.nlm.nih.gov/pubmed/27090105
http://dx.doi.org/10.1038/srep24702
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author Wang, Feng-Xue
Yuan, Dan-Yi
Jin, Ya-Nan
Hu, Lin
Sun, Zhi-Yong
He, Qian
Zhao, Shi-Hua
Zhan, Shu-Bai
Wen, Yong-Jun
author_facet Wang, Feng-Xue
Yuan, Dan-Yi
Jin, Ya-Nan
Hu, Lin
Sun, Zhi-Yong
He, Qian
Zhao, Shi-Hua
Zhan, Shu-Bai
Wen, Yong-Jun
author_sort Wang, Feng-Xue
collection PubMed
description Porcine epidemic diarrhea virus (PEDV) is a highly transmissible coronavirus that causes a severe enteric disease particularly in neonatal piglets. In this study, a rapid method for detecting PEDV was developed based on cross-priming amplification and nucleic acid test strip(CPA-NATS). Five primers specific for the N gene sequence of PEDV were used for the cross-priming amplification. Detection of amplification products based on labeled probe primers was conducted with strip binding antibody of labeled markers. The CPA method was evaluated and compared with a PCR method. The reverse transcription CPA system was further optimized for detecting PEDV RNA in clinical specimens. Results showed that the method was highly specific for the detection of PEDV, and had the same sensitivity as PCR, with detection limit of 10(−6) diluted plasmid containing the target gene of PEDV. It was also successfully applied to detecting PEDV in clinical specimens. The reverse transcription CPA-NATS detection system established in this study offers a specific, sensitive, rapid, and simple detection tool for screening PEDV, which can contribute to strategies in the effective control of PEDV in swine.
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spelling pubmed-48357272016-04-27 Reverse Transcription Cross-Priming Amplification–Nucleic Acid Test Strip for Rapid Detection of Porcine Epidemic Diarrhea Virus Wang, Feng-Xue Yuan, Dan-Yi Jin, Ya-Nan Hu, Lin Sun, Zhi-Yong He, Qian Zhao, Shi-Hua Zhan, Shu-Bai Wen, Yong-Jun Sci Rep Article Porcine epidemic diarrhea virus (PEDV) is a highly transmissible coronavirus that causes a severe enteric disease particularly in neonatal piglets. In this study, a rapid method for detecting PEDV was developed based on cross-priming amplification and nucleic acid test strip(CPA-NATS). Five primers specific for the N gene sequence of PEDV were used for the cross-priming amplification. Detection of amplification products based on labeled probe primers was conducted with strip binding antibody of labeled markers. The CPA method was evaluated and compared with a PCR method. The reverse transcription CPA system was further optimized for detecting PEDV RNA in clinical specimens. Results showed that the method was highly specific for the detection of PEDV, and had the same sensitivity as PCR, with detection limit of 10(−6) diluted plasmid containing the target gene of PEDV. It was also successfully applied to detecting PEDV in clinical specimens. The reverse transcription CPA-NATS detection system established in this study offers a specific, sensitive, rapid, and simple detection tool for screening PEDV, which can contribute to strategies in the effective control of PEDV in swine. Nature Publishing Group 2016-04-19 /pmc/articles/PMC4835727/ /pubmed/27090105 http://dx.doi.org/10.1038/srep24702 Text en Copyright © 2016, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Wang, Feng-Xue
Yuan, Dan-Yi
Jin, Ya-Nan
Hu, Lin
Sun, Zhi-Yong
He, Qian
Zhao, Shi-Hua
Zhan, Shu-Bai
Wen, Yong-Jun
Reverse Transcription Cross-Priming Amplification–Nucleic Acid Test Strip for Rapid Detection of Porcine Epidemic Diarrhea Virus
title Reverse Transcription Cross-Priming Amplification–Nucleic Acid Test Strip for Rapid Detection of Porcine Epidemic Diarrhea Virus
title_full Reverse Transcription Cross-Priming Amplification–Nucleic Acid Test Strip for Rapid Detection of Porcine Epidemic Diarrhea Virus
title_fullStr Reverse Transcription Cross-Priming Amplification–Nucleic Acid Test Strip for Rapid Detection of Porcine Epidemic Diarrhea Virus
title_full_unstemmed Reverse Transcription Cross-Priming Amplification–Nucleic Acid Test Strip for Rapid Detection of Porcine Epidemic Diarrhea Virus
title_short Reverse Transcription Cross-Priming Amplification–Nucleic Acid Test Strip for Rapid Detection of Porcine Epidemic Diarrhea Virus
title_sort reverse transcription cross-priming amplification–nucleic acid test strip for rapid detection of porcine epidemic diarrhea virus
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4835727/
https://www.ncbi.nlm.nih.gov/pubmed/27090105
http://dx.doi.org/10.1038/srep24702
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