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Visual Detection of West Nile Virus Using Reverse Transcription Loop-Mediated Isothermal Amplification Combined with a Vertical Flow Visualization Strip

West Nile virus (WNV) causes a severe zoonosis, which can lead to a large number of casualties and considerable economic losses. A rapid and accurate identification method for WNV for use in field laboratories is urgently needed. Here, a method utilizing reverse transcription loop-mediated isotherma...

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Detalles Bibliográficos
Autores principales: Cao, Zengguo, Wang, Hualei, Wang, Lina, Li, Ling, Jin, Hongli, Xu, Changping, Feng, Na, Wang, Jianzhong, Li, Qian, Zhao, Yongkun, Wang, Tiecheng, Gao, Yuwei, Lu, Yiyu, Yang, Songtao, Xia, Xianzhu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4837158/
https://www.ncbi.nlm.nih.gov/pubmed/27148234
http://dx.doi.org/10.3389/fmicb.2016.00554
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author Cao, Zengguo
Wang, Hualei
Wang, Lina
Li, Ling
Jin, Hongli
Xu, Changping
Feng, Na
Wang, Jianzhong
Li, Qian
Zhao, Yongkun
Wang, Tiecheng
Gao, Yuwei
Lu, Yiyu
Yang, Songtao
Xia, Xianzhu
author_facet Cao, Zengguo
Wang, Hualei
Wang, Lina
Li, Ling
Jin, Hongli
Xu, Changping
Feng, Na
Wang, Jianzhong
Li, Qian
Zhao, Yongkun
Wang, Tiecheng
Gao, Yuwei
Lu, Yiyu
Yang, Songtao
Xia, Xianzhu
author_sort Cao, Zengguo
collection PubMed
description West Nile virus (WNV) causes a severe zoonosis, which can lead to a large number of casualties and considerable economic losses. A rapid and accurate identification method for WNV for use in field laboratories is urgently needed. Here, a method utilizing reverse transcription loop-mediated isothermal amplification combined with a vertical flow visualization strip (RT-LAMP-VF) was developed to detect the envelope (E) gene of WNV. The RT-LAMP-VF assay could detect 10(2) copies/μl of an WNV RNA standard using a 40 min amplification reaction followed by a 2 min incubation of the amplification product on the visualization strip, and no cross-reaction with other closely related members of the Flavivirus genus was observed. The assay was further evaluated using cells and mouse brain tissues infected with a recombinant rabies virus expressing the E protein of WNV. The assay produced sensitivities of 10(1.5) TCID(50)/ml and 10(1.33) TCID(50)/ml for detection of the recombinant virus in the cells and brain tissues, respectively. Overall, the RT-LAMP-VF assay developed in this study is rapid, simple and effective, and it is therefore suitable for clinical application in the field.
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spelling pubmed-48371582016-05-04 Visual Detection of West Nile Virus Using Reverse Transcription Loop-Mediated Isothermal Amplification Combined with a Vertical Flow Visualization Strip Cao, Zengguo Wang, Hualei Wang, Lina Li, Ling Jin, Hongli Xu, Changping Feng, Na Wang, Jianzhong Li, Qian Zhao, Yongkun Wang, Tiecheng Gao, Yuwei Lu, Yiyu Yang, Songtao Xia, Xianzhu Front Microbiol Microbiology West Nile virus (WNV) causes a severe zoonosis, which can lead to a large number of casualties and considerable economic losses. A rapid and accurate identification method for WNV for use in field laboratories is urgently needed. Here, a method utilizing reverse transcription loop-mediated isothermal amplification combined with a vertical flow visualization strip (RT-LAMP-VF) was developed to detect the envelope (E) gene of WNV. The RT-LAMP-VF assay could detect 10(2) copies/μl of an WNV RNA standard using a 40 min amplification reaction followed by a 2 min incubation of the amplification product on the visualization strip, and no cross-reaction with other closely related members of the Flavivirus genus was observed. The assay was further evaluated using cells and mouse brain tissues infected with a recombinant rabies virus expressing the E protein of WNV. The assay produced sensitivities of 10(1.5) TCID(50)/ml and 10(1.33) TCID(50)/ml for detection of the recombinant virus in the cells and brain tissues, respectively. Overall, the RT-LAMP-VF assay developed in this study is rapid, simple and effective, and it is therefore suitable for clinical application in the field. Frontiers Media S.A. 2016-04-20 /pmc/articles/PMC4837158/ /pubmed/27148234 http://dx.doi.org/10.3389/fmicb.2016.00554 Text en Copyright © 2016 Cao, Wang, Wang, Li, Jin, Xu, Feng, Wang, Li, Zhao, Wang, Gao, Lu, Yang and Xia. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Cao, Zengguo
Wang, Hualei
Wang, Lina
Li, Ling
Jin, Hongli
Xu, Changping
Feng, Na
Wang, Jianzhong
Li, Qian
Zhao, Yongkun
Wang, Tiecheng
Gao, Yuwei
Lu, Yiyu
Yang, Songtao
Xia, Xianzhu
Visual Detection of West Nile Virus Using Reverse Transcription Loop-Mediated Isothermal Amplification Combined with a Vertical Flow Visualization Strip
title Visual Detection of West Nile Virus Using Reverse Transcription Loop-Mediated Isothermal Amplification Combined with a Vertical Flow Visualization Strip
title_full Visual Detection of West Nile Virus Using Reverse Transcription Loop-Mediated Isothermal Amplification Combined with a Vertical Flow Visualization Strip
title_fullStr Visual Detection of West Nile Virus Using Reverse Transcription Loop-Mediated Isothermal Amplification Combined with a Vertical Flow Visualization Strip
title_full_unstemmed Visual Detection of West Nile Virus Using Reverse Transcription Loop-Mediated Isothermal Amplification Combined with a Vertical Flow Visualization Strip
title_short Visual Detection of West Nile Virus Using Reverse Transcription Loop-Mediated Isothermal Amplification Combined with a Vertical Flow Visualization Strip
title_sort visual detection of west nile virus using reverse transcription loop-mediated isothermal amplification combined with a vertical flow visualization strip
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4837158/
https://www.ncbi.nlm.nih.gov/pubmed/27148234
http://dx.doi.org/10.3389/fmicb.2016.00554
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