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Learning Biomarker Models for Progression Estimation of Alzheimer’s Disease

Being able to estimate a patient’s progress in the course of Alzheimer’s disease and predicting future progression based on a number of observed biomarker values is of great interest for patients, clinicians and researchers alike. In this work, an approach for disease progress estimation is presente...

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Autores principales: Schmidt-Richberg, Alexander, Ledig, Christian, Guerrero, Ricardo, Molina-Abril, Helena, Frangi, Alejandro, Rueckert, Daniel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4838309/
https://www.ncbi.nlm.nih.gov/pubmed/27096739
http://dx.doi.org/10.1371/journal.pone.0153040
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author Schmidt-Richberg, Alexander
Ledig, Christian
Guerrero, Ricardo
Molina-Abril, Helena
Frangi, Alejandro
Rueckert, Daniel
author_facet Schmidt-Richberg, Alexander
Ledig, Christian
Guerrero, Ricardo
Molina-Abril, Helena
Frangi, Alejandro
Rueckert, Daniel
author_sort Schmidt-Richberg, Alexander
collection PubMed
description Being able to estimate a patient’s progress in the course of Alzheimer’s disease and predicting future progression based on a number of observed biomarker values is of great interest for patients, clinicians and researchers alike. In this work, an approach for disease progress estimation is presented. Based on a set of subjects that convert to a more severe disease stage during the study, models that describe typical trajectories of biomarker values in the course of disease are learned using quantile regression. A novel probabilistic method is then derived to estimate the current disease progress as well as the rate of progression of an individual by fitting acquired biomarkers to the models. A particular strength of the method is its ability to naturally handle missing data. This means, it is applicable even if individual biomarker measurements are missing for a subject without requiring a retraining of the model. The functionality of the presented method is demonstrated using synthetic and—employing cognitive scores and image-based biomarkers—real data from the ADNI study. Further, three possible applications for progress estimation are demonstrated to underline the versatility of the approach: classification, construction of a spatio-temporal disease progression atlas and prediction of future disease progression.
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spelling pubmed-48383092016-04-29 Learning Biomarker Models for Progression Estimation of Alzheimer’s Disease Schmidt-Richberg, Alexander Ledig, Christian Guerrero, Ricardo Molina-Abril, Helena Frangi, Alejandro Rueckert, Daniel PLoS One Research Article Being able to estimate a patient’s progress in the course of Alzheimer’s disease and predicting future progression based on a number of observed biomarker values is of great interest for patients, clinicians and researchers alike. In this work, an approach for disease progress estimation is presented. Based on a set of subjects that convert to a more severe disease stage during the study, models that describe typical trajectories of biomarker values in the course of disease are learned using quantile regression. A novel probabilistic method is then derived to estimate the current disease progress as well as the rate of progression of an individual by fitting acquired biomarkers to the models. A particular strength of the method is its ability to naturally handle missing data. This means, it is applicable even if individual biomarker measurements are missing for a subject without requiring a retraining of the model. The functionality of the presented method is demonstrated using synthetic and—employing cognitive scores and image-based biomarkers—real data from the ADNI study. Further, three possible applications for progress estimation are demonstrated to underline the versatility of the approach: classification, construction of a spatio-temporal disease progression atlas and prediction of future disease progression. Public Library of Science 2016-04-20 /pmc/articles/PMC4838309/ /pubmed/27096739 http://dx.doi.org/10.1371/journal.pone.0153040 Text en © 2016 Schmidt-Richberg et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Schmidt-Richberg, Alexander
Ledig, Christian
Guerrero, Ricardo
Molina-Abril, Helena
Frangi, Alejandro
Rueckert, Daniel
Learning Biomarker Models for Progression Estimation of Alzheimer’s Disease
title Learning Biomarker Models for Progression Estimation of Alzheimer’s Disease
title_full Learning Biomarker Models for Progression Estimation of Alzheimer’s Disease
title_fullStr Learning Biomarker Models for Progression Estimation of Alzheimer’s Disease
title_full_unstemmed Learning Biomarker Models for Progression Estimation of Alzheimer’s Disease
title_short Learning Biomarker Models for Progression Estimation of Alzheimer’s Disease
title_sort learning biomarker models for progression estimation of alzheimer’s disease
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4838309/
https://www.ncbi.nlm.nih.gov/pubmed/27096739
http://dx.doi.org/10.1371/journal.pone.0153040
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