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Learning Biomarker Models for Progression Estimation of Alzheimer’s Disease
Being able to estimate a patient’s progress in the course of Alzheimer’s disease and predicting future progression based on a number of observed biomarker values is of great interest for patients, clinicians and researchers alike. In this work, an approach for disease progress estimation is presente...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4838309/ https://www.ncbi.nlm.nih.gov/pubmed/27096739 http://dx.doi.org/10.1371/journal.pone.0153040 |
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author | Schmidt-Richberg, Alexander Ledig, Christian Guerrero, Ricardo Molina-Abril, Helena Frangi, Alejandro Rueckert, Daniel |
author_facet | Schmidt-Richberg, Alexander Ledig, Christian Guerrero, Ricardo Molina-Abril, Helena Frangi, Alejandro Rueckert, Daniel |
author_sort | Schmidt-Richberg, Alexander |
collection | PubMed |
description | Being able to estimate a patient’s progress in the course of Alzheimer’s disease and predicting future progression based on a number of observed biomarker values is of great interest for patients, clinicians and researchers alike. In this work, an approach for disease progress estimation is presented. Based on a set of subjects that convert to a more severe disease stage during the study, models that describe typical trajectories of biomarker values in the course of disease are learned using quantile regression. A novel probabilistic method is then derived to estimate the current disease progress as well as the rate of progression of an individual by fitting acquired biomarkers to the models. A particular strength of the method is its ability to naturally handle missing data. This means, it is applicable even if individual biomarker measurements are missing for a subject without requiring a retraining of the model. The functionality of the presented method is demonstrated using synthetic and—employing cognitive scores and image-based biomarkers—real data from the ADNI study. Further, three possible applications for progress estimation are demonstrated to underline the versatility of the approach: classification, construction of a spatio-temporal disease progression atlas and prediction of future disease progression. |
format | Online Article Text |
id | pubmed-4838309 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-48383092016-04-29 Learning Biomarker Models for Progression Estimation of Alzheimer’s Disease Schmidt-Richberg, Alexander Ledig, Christian Guerrero, Ricardo Molina-Abril, Helena Frangi, Alejandro Rueckert, Daniel PLoS One Research Article Being able to estimate a patient’s progress in the course of Alzheimer’s disease and predicting future progression based on a number of observed biomarker values is of great interest for patients, clinicians and researchers alike. In this work, an approach for disease progress estimation is presented. Based on a set of subjects that convert to a more severe disease stage during the study, models that describe typical trajectories of biomarker values in the course of disease are learned using quantile regression. A novel probabilistic method is then derived to estimate the current disease progress as well as the rate of progression of an individual by fitting acquired biomarkers to the models. A particular strength of the method is its ability to naturally handle missing data. This means, it is applicable even if individual biomarker measurements are missing for a subject without requiring a retraining of the model. The functionality of the presented method is demonstrated using synthetic and—employing cognitive scores and image-based biomarkers—real data from the ADNI study. Further, three possible applications for progress estimation are demonstrated to underline the versatility of the approach: classification, construction of a spatio-temporal disease progression atlas and prediction of future disease progression. Public Library of Science 2016-04-20 /pmc/articles/PMC4838309/ /pubmed/27096739 http://dx.doi.org/10.1371/journal.pone.0153040 Text en © 2016 Schmidt-Richberg et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Schmidt-Richberg, Alexander Ledig, Christian Guerrero, Ricardo Molina-Abril, Helena Frangi, Alejandro Rueckert, Daniel Learning Biomarker Models for Progression Estimation of Alzheimer’s Disease |
title | Learning Biomarker Models for Progression Estimation of Alzheimer’s Disease |
title_full | Learning Biomarker Models for Progression Estimation of Alzheimer’s Disease |
title_fullStr | Learning Biomarker Models for Progression Estimation of Alzheimer’s Disease |
title_full_unstemmed | Learning Biomarker Models for Progression Estimation of Alzheimer’s Disease |
title_short | Learning Biomarker Models for Progression Estimation of Alzheimer’s Disease |
title_sort | learning biomarker models for progression estimation of alzheimer’s disease |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4838309/ https://www.ncbi.nlm.nih.gov/pubmed/27096739 http://dx.doi.org/10.1371/journal.pone.0153040 |
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