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Data in support of transcriptional regulation and function of Fas-antisense long noncoding RNA during human erythropoiesis

This paper describes data related to a research article titled, “Fas-antisense long noncoding RNA is differentially expressed during maturation of human erythrocytes and confers resistance to Fas-mediated cell death” [1]. Long noncoding RNAs (lncRNAs) are increasingly appreciated for their capacity...

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Autores principales: Villamizar, Olga, Chambers, Christopher B., Mo, Yin-Yuan, Torry, Donald S., Hofstrand, Reese, Riberdy, Janice M., Persons, Derek A., Wilber, Andrew
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4838931/
https://www.ncbi.nlm.nih.gov/pubmed/27141526
http://dx.doi.org/10.1016/j.dib.2016.03.106
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author Villamizar, Olga
Chambers, Christopher B.
Mo, Yin-Yuan
Torry, Donald S.
Hofstrand, Reese
Riberdy, Janice M.
Persons, Derek A.
Wilber, Andrew
author_facet Villamizar, Olga
Chambers, Christopher B.
Mo, Yin-Yuan
Torry, Donald S.
Hofstrand, Reese
Riberdy, Janice M.
Persons, Derek A.
Wilber, Andrew
author_sort Villamizar, Olga
collection PubMed
description This paper describes data related to a research article titled, “Fas-antisense long noncoding RNA is differentially expressed during maturation of human erythrocytes and confers resistance to Fas-mediated cell death” [1]. Long noncoding RNAs (lncRNAs) are increasingly appreciated for their capacity to regulate many steps of gene expression. While recent studies suggest that many lncRNAs are functional, the scope of their actions throughout human biology is largely undefined including human red blood cell development (erythropoiesis). Here we include expression data for 82 lncRNAs during early, intermediate and late stages of human erythropoiesis using a commercial qPCR Array. From these data, we identified lncRNA Fas-antisense 1 (Fas-AS1 or Saf) described in the research article. Also included are 5′ untranslated sequences (UTR) for lncRNA Saf with transcription factor target sequences identified. Quantitative RT-PCR data demonstrate relative levels of critical erythroid transcription factors, GATA-1 and KLF1, in K562 human erythroleukemia cells and maturing erythroblasts derived from human CD34(+) cells. End point and quantitative RT-PCR data for cDNA prepared using random hexamers versus oligo(dT)(18) revealed that lncRNA Saf is not effectively polyadenylated. Finally, we include flow cytometry histograms demonstrating Fas levels on maturing erythroblasts derived from human CD34(+) cells transduced using mock conditions or with lentivirus particles encoding for Saf.
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spelling pubmed-48389312016-05-02 Data in support of transcriptional regulation and function of Fas-antisense long noncoding RNA during human erythropoiesis Villamizar, Olga Chambers, Christopher B. Mo, Yin-Yuan Torry, Donald S. Hofstrand, Reese Riberdy, Janice M. Persons, Derek A. Wilber, Andrew Data Brief Data Article This paper describes data related to a research article titled, “Fas-antisense long noncoding RNA is differentially expressed during maturation of human erythrocytes and confers resistance to Fas-mediated cell death” [1]. Long noncoding RNAs (lncRNAs) are increasingly appreciated for their capacity to regulate many steps of gene expression. While recent studies suggest that many lncRNAs are functional, the scope of their actions throughout human biology is largely undefined including human red blood cell development (erythropoiesis). Here we include expression data for 82 lncRNAs during early, intermediate and late stages of human erythropoiesis using a commercial qPCR Array. From these data, we identified lncRNA Fas-antisense 1 (Fas-AS1 or Saf) described in the research article. Also included are 5′ untranslated sequences (UTR) for lncRNA Saf with transcription factor target sequences identified. Quantitative RT-PCR data demonstrate relative levels of critical erythroid transcription factors, GATA-1 and KLF1, in K562 human erythroleukemia cells and maturing erythroblasts derived from human CD34(+) cells. End point and quantitative RT-PCR data for cDNA prepared using random hexamers versus oligo(dT)(18) revealed that lncRNA Saf is not effectively polyadenylated. Finally, we include flow cytometry histograms demonstrating Fas levels on maturing erythroblasts derived from human CD34(+) cells transduced using mock conditions or with lentivirus particles encoding for Saf. Elsevier 2016-04-07 /pmc/articles/PMC4838931/ /pubmed/27141526 http://dx.doi.org/10.1016/j.dib.2016.03.106 Text en © 2016 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Villamizar, Olga
Chambers, Christopher B.
Mo, Yin-Yuan
Torry, Donald S.
Hofstrand, Reese
Riberdy, Janice M.
Persons, Derek A.
Wilber, Andrew
Data in support of transcriptional regulation and function of Fas-antisense long noncoding RNA during human erythropoiesis
title Data in support of transcriptional regulation and function of Fas-antisense long noncoding RNA during human erythropoiesis
title_full Data in support of transcriptional regulation and function of Fas-antisense long noncoding RNA during human erythropoiesis
title_fullStr Data in support of transcriptional regulation and function of Fas-antisense long noncoding RNA during human erythropoiesis
title_full_unstemmed Data in support of transcriptional regulation and function of Fas-antisense long noncoding RNA during human erythropoiesis
title_short Data in support of transcriptional regulation and function of Fas-antisense long noncoding RNA during human erythropoiesis
title_sort data in support of transcriptional regulation and function of fas-antisense long noncoding rna during human erythropoiesis
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4838931/
https://www.ncbi.nlm.nih.gov/pubmed/27141526
http://dx.doi.org/10.1016/j.dib.2016.03.106
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