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MissMax: alignment-free sequence comparison with mismatches through filtering and heuristics

BACKGROUND: Measuring sequence similarity is central for many problems in bioinformatics. In several contexts alignment-free techniques based on exact occurrences of substrings are faster, but also less accurate, than alignment-based approaches. Recently, several studies attempted to bridge the accu...

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Detalles Bibliográficos
Autor principal: Pizzi, Cinzia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4839165/
https://www.ncbi.nlm.nih.gov/pubmed/27103940
http://dx.doi.org/10.1186/s13015-016-0072-x