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Sensor space group analysis for fNIRS data
BACKGROUND: Functional near-infrared spectroscopy (fNIRS) is a method for monitoring hemoglobin responses using optical probes placed on the scalp. fNIRS spatial resolution is limited by the distance between channels defined as a pair of source and detector, and channel positions are often inconsist...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier/North-Holland Biomedical Press
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4840017/ https://www.ncbi.nlm.nih.gov/pubmed/26952847 http://dx.doi.org/10.1016/j.jneumeth.2016.03.003 |
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author | Tak, S. Uga, M. Flandin, G. Dan, I. Penny, W.D. |
author_facet | Tak, S. Uga, M. Flandin, G. Dan, I. Penny, W.D. |
author_sort | Tak, S. |
collection | PubMed |
description | BACKGROUND: Functional near-infrared spectroscopy (fNIRS) is a method for monitoring hemoglobin responses using optical probes placed on the scalp. fNIRS spatial resolution is limited by the distance between channels defined as a pair of source and detector, and channel positions are often inconsistent across subjects. These challenges can lead to less accurate estimate of group level effects from channel-specific measurements. NEW METHOD: This paper addresses this shortcoming by applying random-effects analysis using summary statistics to interpolated fNIRS topographic images. Specifically, we generate individual contrast images containing the experimental effects of interest in a canonical scalp surface. Random-effects analysis then allows for making inference about the regionally specific effects induced by (potentially) multiple experimental factors in a population. RESULTS: We illustrate the approach using experimental data acquired during a colour-word matching Stroop task, and show that left frontopolar regions are significantly activated in a population during Stroop effects. This result agrees with previous neuroimaging findings. COMPARED WITH EXISTING METHODS: The proposed methods (i) address potential misalignment of sensor locations between subjects using spatial interpolation; (ii) produce experimental effects of interest either on a 2D regular grid or on a 3D triangular mesh, both representations of a canonical scalp surface; and (iii) enables one to infer population effects from fNIRS data using a computationally efficient summary statistic approach (random-effects analysis). Significance of regional effects is assessed using random field theory. CONCLUSIONS: In this paper, we have shown how fNIRS data from multiple subjects can be analysed in sensor space using random-effects analysis. |
format | Online Article Text |
id | pubmed-4840017 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Elsevier/North-Holland Biomedical Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-48400172016-05-02 Sensor space group analysis for fNIRS data Tak, S. Uga, M. Flandin, G. Dan, I. Penny, W.D. J Neurosci Methods Article BACKGROUND: Functional near-infrared spectroscopy (fNIRS) is a method for monitoring hemoglobin responses using optical probes placed on the scalp. fNIRS spatial resolution is limited by the distance between channels defined as a pair of source and detector, and channel positions are often inconsistent across subjects. These challenges can lead to less accurate estimate of group level effects from channel-specific measurements. NEW METHOD: This paper addresses this shortcoming by applying random-effects analysis using summary statistics to interpolated fNIRS topographic images. Specifically, we generate individual contrast images containing the experimental effects of interest in a canonical scalp surface. Random-effects analysis then allows for making inference about the regionally specific effects induced by (potentially) multiple experimental factors in a population. RESULTS: We illustrate the approach using experimental data acquired during a colour-word matching Stroop task, and show that left frontopolar regions are significantly activated in a population during Stroop effects. This result agrees with previous neuroimaging findings. COMPARED WITH EXISTING METHODS: The proposed methods (i) address potential misalignment of sensor locations between subjects using spatial interpolation; (ii) produce experimental effects of interest either on a 2D regular grid or on a 3D triangular mesh, both representations of a canonical scalp surface; and (iii) enables one to infer population effects from fNIRS data using a computationally efficient summary statistic approach (random-effects analysis). Significance of regional effects is assessed using random field theory. CONCLUSIONS: In this paper, we have shown how fNIRS data from multiple subjects can be analysed in sensor space using random-effects analysis. Elsevier/North-Holland Biomedical Press 2016-05-01 /pmc/articles/PMC4840017/ /pubmed/26952847 http://dx.doi.org/10.1016/j.jneumeth.2016.03.003 Text en © 2016 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Tak, S. Uga, M. Flandin, G. Dan, I. Penny, W.D. Sensor space group analysis for fNIRS data |
title | Sensor space group analysis for fNIRS data |
title_full | Sensor space group analysis for fNIRS data |
title_fullStr | Sensor space group analysis for fNIRS data |
title_full_unstemmed | Sensor space group analysis for fNIRS data |
title_short | Sensor space group analysis for fNIRS data |
title_sort | sensor space group analysis for fnirs data |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4840017/ https://www.ncbi.nlm.nih.gov/pubmed/26952847 http://dx.doi.org/10.1016/j.jneumeth.2016.03.003 |
work_keys_str_mv | AT taks sensorspacegroupanalysisforfnirsdata AT ugam sensorspacegroupanalysisforfnirsdata AT flanding sensorspacegroupanalysisforfnirsdata AT dani sensorspacegroupanalysisforfnirsdata AT pennywd sensorspacegroupanalysisforfnirsdata |