Cargando…

Clonify: unseeded antibody lineage assignment from next-generation sequencing data

Defining the dynamics and maturation processes of antibody clonal lineages is crucial to understanding the humoral response to infection and immunization. Although individual antibody lineages have been previously analyzed in isolation, these studies provide only a narrow view of the total antibody...

Descripción completa

Detalles Bibliográficos
Autores principales:	Briney, Bryan, Le, Khoa, Zhu, Jiang, Burton, Dennis R.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group 2016
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4840318/ https://www.ncbi.nlm.nih.gov/pubmed/27102563 http://dx.doi.org/10.1038/srep23901

Ejemplares similares

Comparisons of the antibody repertoires of a humanized rodent and humans by high throughput sequencing
por: Joyce, Collin, et al.
Publicado: (2020)

In vitro potentiation of doxorubicin by unseeded controlled non-inertial ultrasound cavitation
por: Fant, Cécile, et al.
Publicado: (2019)

Rapid Assessment of Crystal Nucleation and Growth Kinetics: Comparison of Seeded and Unseeded Experiments
por: Cashmore, Andrew, et al.
Publicado: (2023)

AntiRef: reference clusters of human antibody sequences
por: Briney, Bryan
Publicado: (2023)

Commonality despite exceptional diversity in the baseline human antibody repertoire
por: Briney, Bryan, et al.
Publicado: (2019)

Efficient isolation of rare B cells using next-generation antigen barcoding
por: Hurtado, Jonathan, et al.
Publicado: (2023)

NGSNGS: next-generation simulator for next-generation sequencing data
por: Henriksen, Rasmus Amund, et al.
Publicado: (2023)

Next-Generation Sequencing of Antibody Display Repertoires
por: Rouet, Romain, et al.
Publicado: (2018)

Y-LineageTracker: a high-throughput analysis framework for Y-chromosomal next-generation sequencing data
por: Chen, Hao, et al.
Publicado: (2021)

Archiving next generation sequencing data
por: Shumway, Martin, et al.
Publicado: (2010)

Bioinformatics for Next Generation Sequencing Data
por: Magi, Alberto, et al.
Publicado: (2010)

Genomic surveillance of Rift Valley fever virus: from sequencing to lineage assignment
por: Juma, John, et al.
Publicado: (2022)

Next generation sequencing data in the phylogenetic relationships of the genus Molossus (Chiroptera, Molossidae)
por: Loureiro, Livia O., et al.
Publicado: (2020)

Development and Validation of a Reference Data Set for Assigning Staphylococcus Species Based on Next-Generation Sequencing of the 16S-23S rRNA Region
por: Kosecka-Strojek, Maja, et al.
Publicado: (2019)

Development of a reference data set for assigning Streptococcus and Enterococcus species based on next generation sequencing of the 16S–23S rRNA region
por: Kosecka-Strojek, Maja, et al.
Publicado: (2019)

The Application of Next Generation Sequencing to the Understanding of Antibody Repertoires
por: Mathonet, Pascale, et al.
Publicado: (2013)

Looking for therapeutic antibodies in next-generation sequencing repositories
por: Krawczyk, Konrad, et al.
Publicado: (2019)

Visual programming for next-generation sequencing data analytics
por: Milicchio, Franco, et al.
Publicado: (2016)

Next-generation sequencing for MRD monitoring in B-lineage malignancies: from bench to bedside
por: Deng, Xinyue, et al.
Publicado: (2022)

Parentage assignment with genotyping‐by‐sequencing data
por: Whalen, Andrew, et al.
Publicado: (2018)

Recovery of erectile function comparing autologous nerve grafts, unseeded conduits, Schwann-cell-seeded guidance tubes and GDNF-overexpressing Schwann cell grafts
por: May, Florian, et al.
Publicado: (2016)

Statistical analysis of next generation sequencing data
por: Datta, Somnath, et al.
Publicado: (2014)

Managing and Analyzing Next-Generation Sequence Data
por: Richter, Brent G., et al.
Publicado: (2009)

ANGSD: Analysis of Next Generation Sequencing Data
por: Korneliussen, Thorfinn Sand, et al.
Publicado: (2014)

Identification of indels in next-generation sequencing data
por: Ratan, Aakrosh, et al.
Publicado: (2015)

Genotyping microsatellites in next-generation sequencing data
por: Dashnow, Harriet, et al.
Publicado: (2015)

Insights into next generation sequencing guided antibody selection strategies
por: Erasmus, M. Frank, et al.
Publicado: (2023)

Secondary mechanisms of diversification in the human antibody repertoire
por: Briney, Bryan S., et al.
Publicado: (2013)

The Antibody Genetics of Multiple Sclerosis: Comparing Next-Generation Sequencing to Sanger Sequencing
por: Rounds, William H., et al.
Publicado: (2014)

Multilocus Sequence Typing (MLST) for Lineage Assignment and High Resolution Diversity Studies in Trypanosoma cruzi
por: Yeo, Matthew, et al.
Publicado: (2011)

LineageSpecificSeqgen: generating sequence data with lineage-specific variation in the proportion of variable sites
por: Shavit Grievink, Liat, et al.
Publicado: (2008)

LineageSpecificSeqgen: generating sequence data with lineage-specific variation in the proportion of variable sites
por: Grievink, Liat Shavit, et al.
Publicado: (2009)

SAMStat: monitoring biases in next generation sequencing data
por: Lassmann, Timo, et al.
Publicado: (2011)

Zseq: An Approach for Preprocessing Next-Generation Sequencing Data
por: Alkhateeb, Abedalrhman, et al.
Publicado: (2017)

Next-Generation Sequencing
por: Xiong, Momiao, et al.
Publicado: (2010)

Next-generation sequencing
por: Reis-Filho, Jorge S
Publicado: (2009)

Novel Computational Technologies for Next-Generation Sequencing Data Analysis and Their Applications
por: Tang, Chuan Yi, et al.
Publicado: (2015)

Next generation sequencing technologies for next generation plant breeding
por: Ray, Soham, et al.
Publicado: (2014)

Assignment of epidemiological lineages in an emerging pandemic using the pangolin tool
por: O’Toole, Áine, et al.
Publicado: (2021)

SequencErr: measuring and suppressing sequencer errors in next-generation sequencing data
por: Davis, Eric M., et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_3vptu0rh5hnt7rtrdj58oigrpf