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Systematic and efficient navigating potential energy surface: Data for silver doped gold clusters
Locating global minimum of certain atomistic ensemble is known to be a highly challenging and resource consuming task. This dataset represents joint usage of the semi-empirical PM7 Hamiltonian, Broyden–Fletcher–Goldfarb–Shanno algorithm and basin hopping scheme to navigate a potential energy surface...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Elsevier
2016
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4842848/ https://www.ncbi.nlm.nih.gov/pubmed/27158643 http://dx.doi.org/10.1016/j.dib.2016.04.014 |
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author | Chaban, Vitaly V. |
author_facet | Chaban, Vitaly V. |
author_sort | Chaban, Vitaly V. |
collection | PubMed |
description | Locating global minimum of certain atomistic ensemble is known to be a highly challenging and resource consuming task. This dataset represents joint usage of the semi-empirical PM7 Hamiltonian, Broyden–Fletcher–Goldfarb–Shanno algorithm and basin hopping scheme to navigate a potential energy surface. The Au(20) nanocluster was used for calibration as its global minimum structure is well-known. Furthermore, Au(18)Ag(2) and Au(15)Ag(5) were simulated for illustration of the algorithm performance. The work shows encouraging results and, particularly, underlines proper accuracy of PM7 as applied to this type of heavy metal systems. The reported dataset motivates to use the benchmarked method for studying potential energy surfaces of manifold systems and locate their global-minimum atomistic configurations. |
format | Online Article Text |
id | pubmed-4842848 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-48428482016-05-06 Systematic and efficient navigating potential energy surface: Data for silver doped gold clusters Chaban, Vitaly V. Data Brief Data Article Locating global minimum of certain atomistic ensemble is known to be a highly challenging and resource consuming task. This dataset represents joint usage of the semi-empirical PM7 Hamiltonian, Broyden–Fletcher–Goldfarb–Shanno algorithm and basin hopping scheme to navigate a potential energy surface. The Au(20) nanocluster was used for calibration as its global minimum structure is well-known. Furthermore, Au(18)Ag(2) and Au(15)Ag(5) were simulated for illustration of the algorithm performance. The work shows encouraging results and, particularly, underlines proper accuracy of PM7 as applied to this type of heavy metal systems. The reported dataset motivates to use the benchmarked method for studying potential energy surfaces of manifold systems and locate their global-minimum atomistic configurations. Elsevier 2016-04-11 /pmc/articles/PMC4842848/ /pubmed/27158643 http://dx.doi.org/10.1016/j.dib.2016.04.014 Text en © 2016 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Data Article Chaban, Vitaly V. Systematic and efficient navigating potential energy surface: Data for silver doped gold clusters |
title | Systematic and efficient navigating potential energy surface: Data for silver doped gold clusters |
title_full | Systematic and efficient navigating potential energy surface: Data for silver doped gold clusters |
title_fullStr | Systematic and efficient navigating potential energy surface: Data for silver doped gold clusters |
title_full_unstemmed | Systematic and efficient navigating potential energy surface: Data for silver doped gold clusters |
title_short | Systematic and efficient navigating potential energy surface: Data for silver doped gold clusters |
title_sort | systematic and efficient navigating potential energy surface: data for silver doped gold clusters |
topic | Data Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4842848/ https://www.ncbi.nlm.nih.gov/pubmed/27158643 http://dx.doi.org/10.1016/j.dib.2016.04.014 |
work_keys_str_mv | AT chabanvitalyv systematicandefficientnavigatingpotentialenergysurfacedataforsilverdopedgoldclusters |