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Preparation data of the bromodomains BRD3(1), BRD3(2), BRD4(1), and BRPF1B and crystallization of BRD4(1)-inhibitor complexes

This article presents detailed purification procedures for the bromodomains BRD3(1), BRD3(2), BRD4(1), and BRPF1B. In addition we provide crystallization protocols for apo BRD4(1) and BRD4(1) in complex with numerous inhibitors. The protocols described here were successfully applied to obtain affini...

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Autores principales: Hügle, Martin, Lucas, Xavier, Weitzel, Gerhard, Ostrovskyi, Dmytro, Breit, Bernhard, Gerhardt, Stefan, Schmidtkunz, Karin, Jung, Manfred, Schüle, Roland, Einsle, Oliver, Günther, Stefan, Wohlwend, Daniel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4845076/
https://www.ncbi.nlm.nih.gov/pubmed/27158652
http://dx.doi.org/10.1016/j.dib.2016.04.009
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author Hügle, Martin
Lucas, Xavier
Weitzel, Gerhard
Ostrovskyi, Dmytro
Breit, Bernhard
Gerhardt, Stefan
Schmidtkunz, Karin
Jung, Manfred
Schüle, Roland
Einsle, Oliver
Günther, Stefan
Wohlwend, Daniel
author_facet Hügle, Martin
Lucas, Xavier
Weitzel, Gerhard
Ostrovskyi, Dmytro
Breit, Bernhard
Gerhardt, Stefan
Schmidtkunz, Karin
Jung, Manfred
Schüle, Roland
Einsle, Oliver
Günther, Stefan
Wohlwend, Daniel
author_sort Hügle, Martin
collection PubMed
description This article presents detailed purification procedures for the bromodomains BRD3(1), BRD3(2), BRD4(1), and BRPF1B. In addition we provide crystallization protocols for apo BRD4(1) and BRD4(1) in complex with numerous inhibitors. The protocols described here were successfully applied to obtain affinity data by isothermal titration calorimetry (ITC) and by differential scanning fluorimetry (DSF) as well as structural characterizations of BRD4(1) inhibitor complexes (PDB codes: PDB: 4LYI, PDB: 4LZS, PDB: 4LYW, PDB: 4LZR, PDB: 4LYS, PDB: 5D24, PDB: 5D25, PDB: 5D26, PDB: 5D3H, PDB: 5D3J, PDB: 5D3L, PDB: 5D3N, PDB: 5D3P, PDB: 5D3R, PDB: 5D3S, PDB: 5D3T). These data have been reported previously and are discussed in more detail elsewhere [1], [2].
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spelling pubmed-48450762016-05-06 Preparation data of the bromodomains BRD3(1), BRD3(2), BRD4(1), and BRPF1B and crystallization of BRD4(1)-inhibitor complexes Hügle, Martin Lucas, Xavier Weitzel, Gerhard Ostrovskyi, Dmytro Breit, Bernhard Gerhardt, Stefan Schmidtkunz, Karin Jung, Manfred Schüle, Roland Einsle, Oliver Günther, Stefan Wohlwend, Daniel Data Brief Data Article This article presents detailed purification procedures for the bromodomains BRD3(1), BRD3(2), BRD4(1), and BRPF1B. In addition we provide crystallization protocols for apo BRD4(1) and BRD4(1) in complex with numerous inhibitors. The protocols described here were successfully applied to obtain affinity data by isothermal titration calorimetry (ITC) and by differential scanning fluorimetry (DSF) as well as structural characterizations of BRD4(1) inhibitor complexes (PDB codes: PDB: 4LYI, PDB: 4LZS, PDB: 4LYW, PDB: 4LZR, PDB: 4LYS, PDB: 5D24, PDB: 5D25, PDB: 5D26, PDB: 5D3H, PDB: 5D3J, PDB: 5D3L, PDB: 5D3N, PDB: 5D3P, PDB: 5D3R, PDB: 5D3S, PDB: 5D3T). These data have been reported previously and are discussed in more detail elsewhere [1], [2]. Elsevier 2016-04-11 /pmc/articles/PMC4845076/ /pubmed/27158652 http://dx.doi.org/10.1016/j.dib.2016.04.009 Text en © 2016 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Hügle, Martin
Lucas, Xavier
Weitzel, Gerhard
Ostrovskyi, Dmytro
Breit, Bernhard
Gerhardt, Stefan
Schmidtkunz, Karin
Jung, Manfred
Schüle, Roland
Einsle, Oliver
Günther, Stefan
Wohlwend, Daniel
Preparation data of the bromodomains BRD3(1), BRD3(2), BRD4(1), and BRPF1B and crystallization of BRD4(1)-inhibitor complexes
title Preparation data of the bromodomains BRD3(1), BRD3(2), BRD4(1), and BRPF1B and crystallization of BRD4(1)-inhibitor complexes
title_full Preparation data of the bromodomains BRD3(1), BRD3(2), BRD4(1), and BRPF1B and crystallization of BRD4(1)-inhibitor complexes
title_fullStr Preparation data of the bromodomains BRD3(1), BRD3(2), BRD4(1), and BRPF1B and crystallization of BRD4(1)-inhibitor complexes
title_full_unstemmed Preparation data of the bromodomains BRD3(1), BRD3(2), BRD4(1), and BRPF1B and crystallization of BRD4(1)-inhibitor complexes
title_short Preparation data of the bromodomains BRD3(1), BRD3(2), BRD4(1), and BRPF1B and crystallization of BRD4(1)-inhibitor complexes
title_sort preparation data of the bromodomains brd3(1), brd3(2), brd4(1), and brpf1b and crystallization of brd4(1)-inhibitor complexes
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4845076/
https://www.ncbi.nlm.nih.gov/pubmed/27158652
http://dx.doi.org/10.1016/j.dib.2016.04.009
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