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Accelerating functional MRI using fixed‐rank approximations and radial‐cartesian sampling

PURPOSE: Recently, k‐t FASTER (fMRI Accelerated in Space‐time by means of Truncation of Effective Rank) was introduced for rank‐constrained acceleration of fMRI data acquisition. Here we demonstrate improvements achieved through a hybrid three‐dimensional radial‐Cartesian sampling approach that allo...

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Autores principales: Chiew, Mark, Graedel, Nadine N., McNab, Jennifer A., Smith, Stephen M., Miller, Karla L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4847647/
https://www.ncbi.nlm.nih.gov/pubmed/26777798
http://dx.doi.org/10.1002/mrm.26079
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author Chiew, Mark
Graedel, Nadine N.
McNab, Jennifer A.
Smith, Stephen M.
Miller, Karla L.
author_facet Chiew, Mark
Graedel, Nadine N.
McNab, Jennifer A.
Smith, Stephen M.
Miller, Karla L.
author_sort Chiew, Mark
collection PubMed
description PURPOSE: Recently, k‐t FASTER (fMRI Accelerated in Space‐time by means of Truncation of Effective Rank) was introduced for rank‐constrained acceleration of fMRI data acquisition. Here we demonstrate improvements achieved through a hybrid three‐dimensional radial‐Cartesian sampling approach that allows posthoc selection of acceleration factors, as well as incorporation of coil sensitivity encoding in the reconstruction. METHODS: The multicoil rank‐constrained reconstruction used hard thresholding and shrinkage on matrix singular values of the space‐time data matrix, using sensitivity encoding and the nonuniform Fast Fourier Transform to enforce data consistency in the multicoil non‐Cartesian k‐t domain. Variable acceleration factors were made possible using a radial increment based on the golden ratio. Both retrospective and prospectively under‐sampled data were used to assess the fidelity of the enhancements to the k‐t FASTER technique in resting and task‐fMRI data. RESULTS: The improved k‐t FASTER is capable of tailoring acceleration factors for recovery of different signal components, achieving up to R = 12.5 acceleration in visual‐motor task data. The enhancements reduce data matrix reconstruction errors even at much higher acceleration factors when compared directly with the original k‐t FASTER approach. CONCLUSION: We have shown that k‐t FASTER can be used to significantly accelerate fMRI data acquisition with little penalty to data quality. Magn Reson Med 76:1825–1836, 2016. © 2016 The Authors Magnetic Resonance in Medicine published by Wiley Periodicals, Inc. on behalf of International Society for Magnetic Resonance in Medicine. This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
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spelling pubmed-48476472016-11-16 Accelerating functional MRI using fixed‐rank approximations and radial‐cartesian sampling Chiew, Mark Graedel, Nadine N. McNab, Jennifer A. Smith, Stephen M. Miller, Karla L. Magn Reson Med Imaging Methodology—Full Papers PURPOSE: Recently, k‐t FASTER (fMRI Accelerated in Space‐time by means of Truncation of Effective Rank) was introduced for rank‐constrained acceleration of fMRI data acquisition. Here we demonstrate improvements achieved through a hybrid three‐dimensional radial‐Cartesian sampling approach that allows posthoc selection of acceleration factors, as well as incorporation of coil sensitivity encoding in the reconstruction. METHODS: The multicoil rank‐constrained reconstruction used hard thresholding and shrinkage on matrix singular values of the space‐time data matrix, using sensitivity encoding and the nonuniform Fast Fourier Transform to enforce data consistency in the multicoil non‐Cartesian k‐t domain. Variable acceleration factors were made possible using a radial increment based on the golden ratio. Both retrospective and prospectively under‐sampled data were used to assess the fidelity of the enhancements to the k‐t FASTER technique in resting and task‐fMRI data. RESULTS: The improved k‐t FASTER is capable of tailoring acceleration factors for recovery of different signal components, achieving up to R = 12.5 acceleration in visual‐motor task data. The enhancements reduce data matrix reconstruction errors even at much higher acceleration factors when compared directly with the original k‐t FASTER approach. CONCLUSION: We have shown that k‐t FASTER can be used to significantly accelerate fMRI data acquisition with little penalty to data quality. Magn Reson Med 76:1825–1836, 2016. © 2016 The Authors Magnetic Resonance in Medicine published by Wiley Periodicals, Inc. on behalf of International Society for Magnetic Resonance in Medicine. This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. John Wiley and Sons Inc. 2016-01-17 2016-12 /pmc/articles/PMC4847647/ /pubmed/26777798 http://dx.doi.org/10.1002/mrm.26079 Text en © 2016 The Authors Magnetic Resonance in Medicine published by Wiley Periodicals, Inc. on behalf of International Society for Magnetic Resonance in Medicine. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Imaging Methodology—Full Papers
Chiew, Mark
Graedel, Nadine N.
McNab, Jennifer A.
Smith, Stephen M.
Miller, Karla L.
Accelerating functional MRI using fixed‐rank approximations and radial‐cartesian sampling
title Accelerating functional MRI using fixed‐rank approximations and radial‐cartesian sampling
title_full Accelerating functional MRI using fixed‐rank approximations and radial‐cartesian sampling
title_fullStr Accelerating functional MRI using fixed‐rank approximations and radial‐cartesian sampling
title_full_unstemmed Accelerating functional MRI using fixed‐rank approximations and radial‐cartesian sampling
title_short Accelerating functional MRI using fixed‐rank approximations and radial‐cartesian sampling
title_sort accelerating functional mri using fixed‐rank approximations and radial‐cartesian sampling
topic Imaging Methodology—Full Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4847647/
https://www.ncbi.nlm.nih.gov/pubmed/26777798
http://dx.doi.org/10.1002/mrm.26079
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