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Spontaneous formation and base pairing of plausible prebiotic nucleotides in water

The RNA World hypothesis presupposes that abiotic reactions originally produced nucleotides, the monomers of RNA and universal constituents of metabolism. However, compatible prebiotic reactions for the synthesis of complementary (that is, base pairing) nucleotides and mechanisms for their mutual se...

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Autores principales: Cafferty, Brian J., Fialho, David M., Khanam, Jaheda, Krishnamurthy, Ramanarayanan, Hud, Nicholas V.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4848480/
https://www.ncbi.nlm.nih.gov/pubmed/27108699
http://dx.doi.org/10.1038/ncomms11328
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author Cafferty, Brian J.
Fialho, David M.
Khanam, Jaheda
Krishnamurthy, Ramanarayanan
Hud, Nicholas V.
author_facet Cafferty, Brian J.
Fialho, David M.
Khanam, Jaheda
Krishnamurthy, Ramanarayanan
Hud, Nicholas V.
author_sort Cafferty, Brian J.
collection PubMed
description The RNA World hypothesis presupposes that abiotic reactions originally produced nucleotides, the monomers of RNA and universal constituents of metabolism. However, compatible prebiotic reactions for the synthesis of complementary (that is, base pairing) nucleotides and mechanisms for their mutual selection within a complex chemical environment have not been reported. Here we show that two plausible prebiotic heterocycles, melamine and barbituric acid, form glycosidic linkages with ribose and ribose-5-phosphate in water to produce nucleosides and nucleotides in good yields. Even without purification, these nucleotides base pair in aqueous solution to create linear supramolecular assemblies containing thousands of ordered nucleotides. Nucleotide anomerization and supramolecular assemblies favour the biologically relevant β-anomer form of these ribonucleotides, revealing abiotic mechanisms by which nucleotide structure and configuration could have been originally favoured. These findings indicate that nucleotide formation and selection may have been robust processes on the prebiotic Earth, if other nucleobases preceded those of extant life.
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spelling pubmed-48484802016-05-05 Spontaneous formation and base pairing of plausible prebiotic nucleotides in water Cafferty, Brian J. Fialho, David M. Khanam, Jaheda Krishnamurthy, Ramanarayanan Hud, Nicholas V. Nat Commun Article The RNA World hypothesis presupposes that abiotic reactions originally produced nucleotides, the monomers of RNA and universal constituents of metabolism. However, compatible prebiotic reactions for the synthesis of complementary (that is, base pairing) nucleotides and mechanisms for their mutual selection within a complex chemical environment have not been reported. Here we show that two plausible prebiotic heterocycles, melamine and barbituric acid, form glycosidic linkages with ribose and ribose-5-phosphate in water to produce nucleosides and nucleotides in good yields. Even without purification, these nucleotides base pair in aqueous solution to create linear supramolecular assemblies containing thousands of ordered nucleotides. Nucleotide anomerization and supramolecular assemblies favour the biologically relevant β-anomer form of these ribonucleotides, revealing abiotic mechanisms by which nucleotide structure and configuration could have been originally favoured. These findings indicate that nucleotide formation and selection may have been robust processes on the prebiotic Earth, if other nucleobases preceded those of extant life. Nature Publishing Group 2016-04-25 /pmc/articles/PMC4848480/ /pubmed/27108699 http://dx.doi.org/10.1038/ncomms11328 Text en Copyright © 2016, Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Cafferty, Brian J.
Fialho, David M.
Khanam, Jaheda
Krishnamurthy, Ramanarayanan
Hud, Nicholas V.
Spontaneous formation and base pairing of plausible prebiotic nucleotides in water
title Spontaneous formation and base pairing of plausible prebiotic nucleotides in water
title_full Spontaneous formation and base pairing of plausible prebiotic nucleotides in water
title_fullStr Spontaneous formation and base pairing of plausible prebiotic nucleotides in water
title_full_unstemmed Spontaneous formation and base pairing of plausible prebiotic nucleotides in water
title_short Spontaneous formation and base pairing of plausible prebiotic nucleotides in water
title_sort spontaneous formation and base pairing of plausible prebiotic nucleotides in water
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4848480/
https://www.ncbi.nlm.nih.gov/pubmed/27108699
http://dx.doi.org/10.1038/ncomms11328
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