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Restricted Gene Flow for Gadus macrocephalus from Yellow Sea Based on Microsatellite Markers: Geographic Block of Tsushima Current

The Pacific cod Gadus macrocephalus is a demersal, economically important fish in the family Gadidae. Population genetic differentiation of Pacific cod was examined across its northwestern Pacific range by screening variation of eight microsatellite loci in the present study. All four populations ex...

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Detalles Bibliográficos
Autores principales: Song, Na, Liu, Ming, Yanagimoto, Takashi, Sakurai, Yasunori, Han, Zhi-Qiang, Gao, Tian-Xiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4848923/
https://www.ncbi.nlm.nih.gov/pubmed/27043534
http://dx.doi.org/10.3390/ijms17040467
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author Song, Na
Liu, Ming
Yanagimoto, Takashi
Sakurai, Yasunori
Han, Zhi-Qiang
Gao, Tian-Xiang
author_facet Song, Na
Liu, Ming
Yanagimoto, Takashi
Sakurai, Yasunori
Han, Zhi-Qiang
Gao, Tian-Xiang
author_sort Song, Na
collection PubMed
description The Pacific cod Gadus macrocephalus is a demersal, economically important fish in the family Gadidae. Population genetic differentiation of Pacific cod was examined across its northwestern Pacific range by screening variation of eight microsatellite loci in the present study. All four populations exhibited high genetic diversity. Pairwise fixation index (F(st)) suggested a moderate to high level of genetic differentiation among populations. Population of the Yellow Sea (YS) showed higher genetic difference compared to the other three populations based on the results of pairwise F(st), three-dimensional factorial correspondence analysis (3D-FCA) and STRUCTURE, which implied restricted gene flow among them. Wilcoxon signed rank tests suggested no significant heterozygosity excess and no recent genetic bottleneck events were detected. Microsatellite DNA is an effective molecular marker for detecting the phylogeographic pattern of Pacific cod, and these Pacific cod populations should be three management units.
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spelling pubmed-48489232016-05-04 Restricted Gene Flow for Gadus macrocephalus from Yellow Sea Based on Microsatellite Markers: Geographic Block of Tsushima Current Song, Na Liu, Ming Yanagimoto, Takashi Sakurai, Yasunori Han, Zhi-Qiang Gao, Tian-Xiang Int J Mol Sci Article The Pacific cod Gadus macrocephalus is a demersal, economically important fish in the family Gadidae. Population genetic differentiation of Pacific cod was examined across its northwestern Pacific range by screening variation of eight microsatellite loci in the present study. All four populations exhibited high genetic diversity. Pairwise fixation index (F(st)) suggested a moderate to high level of genetic differentiation among populations. Population of the Yellow Sea (YS) showed higher genetic difference compared to the other three populations based on the results of pairwise F(st), three-dimensional factorial correspondence analysis (3D-FCA) and STRUCTURE, which implied restricted gene flow among them. Wilcoxon signed rank tests suggested no significant heterozygosity excess and no recent genetic bottleneck events were detected. Microsatellite DNA is an effective molecular marker for detecting the phylogeographic pattern of Pacific cod, and these Pacific cod populations should be three management units. MDPI 2016-03-29 /pmc/articles/PMC4848923/ /pubmed/27043534 http://dx.doi.org/10.3390/ijms17040467 Text en © 2016 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons by Attribution (CC-BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Song, Na
Liu, Ming
Yanagimoto, Takashi
Sakurai, Yasunori
Han, Zhi-Qiang
Gao, Tian-Xiang
Restricted Gene Flow for Gadus macrocephalus from Yellow Sea Based on Microsatellite Markers: Geographic Block of Tsushima Current
title Restricted Gene Flow for Gadus macrocephalus from Yellow Sea Based on Microsatellite Markers: Geographic Block of Tsushima Current
title_full Restricted Gene Flow for Gadus macrocephalus from Yellow Sea Based on Microsatellite Markers: Geographic Block of Tsushima Current
title_fullStr Restricted Gene Flow for Gadus macrocephalus from Yellow Sea Based on Microsatellite Markers: Geographic Block of Tsushima Current
title_full_unstemmed Restricted Gene Flow for Gadus macrocephalus from Yellow Sea Based on Microsatellite Markers: Geographic Block of Tsushima Current
title_short Restricted Gene Flow for Gadus macrocephalus from Yellow Sea Based on Microsatellite Markers: Geographic Block of Tsushima Current
title_sort restricted gene flow for gadus macrocephalus from yellow sea based on microsatellite markers: geographic block of tsushima current
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4848923/
https://www.ncbi.nlm.nih.gov/pubmed/27043534
http://dx.doi.org/10.3390/ijms17040467
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