Cargando…
Restricted Gene Flow for Gadus macrocephalus from Yellow Sea Based on Microsatellite Markers: Geographic Block of Tsushima Current
The Pacific cod Gadus macrocephalus is a demersal, economically important fish in the family Gadidae. Population genetic differentiation of Pacific cod was examined across its northwestern Pacific range by screening variation of eight microsatellite loci in the present study. All four populations ex...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4848923/ https://www.ncbi.nlm.nih.gov/pubmed/27043534 http://dx.doi.org/10.3390/ijms17040467 |
_version_ | 1782429448848539648 |
---|---|
author | Song, Na Liu, Ming Yanagimoto, Takashi Sakurai, Yasunori Han, Zhi-Qiang Gao, Tian-Xiang |
author_facet | Song, Na Liu, Ming Yanagimoto, Takashi Sakurai, Yasunori Han, Zhi-Qiang Gao, Tian-Xiang |
author_sort | Song, Na |
collection | PubMed |
description | The Pacific cod Gadus macrocephalus is a demersal, economically important fish in the family Gadidae. Population genetic differentiation of Pacific cod was examined across its northwestern Pacific range by screening variation of eight microsatellite loci in the present study. All four populations exhibited high genetic diversity. Pairwise fixation index (F(st)) suggested a moderate to high level of genetic differentiation among populations. Population of the Yellow Sea (YS) showed higher genetic difference compared to the other three populations based on the results of pairwise F(st), three-dimensional factorial correspondence analysis (3D-FCA) and STRUCTURE, which implied restricted gene flow among them. Wilcoxon signed rank tests suggested no significant heterozygosity excess and no recent genetic bottleneck events were detected. Microsatellite DNA is an effective molecular marker for detecting the phylogeographic pattern of Pacific cod, and these Pacific cod populations should be three management units. |
format | Online Article Text |
id | pubmed-4848923 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-48489232016-05-04 Restricted Gene Flow for Gadus macrocephalus from Yellow Sea Based on Microsatellite Markers: Geographic Block of Tsushima Current Song, Na Liu, Ming Yanagimoto, Takashi Sakurai, Yasunori Han, Zhi-Qiang Gao, Tian-Xiang Int J Mol Sci Article The Pacific cod Gadus macrocephalus is a demersal, economically important fish in the family Gadidae. Population genetic differentiation of Pacific cod was examined across its northwestern Pacific range by screening variation of eight microsatellite loci in the present study. All four populations exhibited high genetic diversity. Pairwise fixation index (F(st)) suggested a moderate to high level of genetic differentiation among populations. Population of the Yellow Sea (YS) showed higher genetic difference compared to the other three populations based on the results of pairwise F(st), three-dimensional factorial correspondence analysis (3D-FCA) and STRUCTURE, which implied restricted gene flow among them. Wilcoxon signed rank tests suggested no significant heterozygosity excess and no recent genetic bottleneck events were detected. Microsatellite DNA is an effective molecular marker for detecting the phylogeographic pattern of Pacific cod, and these Pacific cod populations should be three management units. MDPI 2016-03-29 /pmc/articles/PMC4848923/ /pubmed/27043534 http://dx.doi.org/10.3390/ijms17040467 Text en © 2016 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons by Attribution (CC-BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Song, Na Liu, Ming Yanagimoto, Takashi Sakurai, Yasunori Han, Zhi-Qiang Gao, Tian-Xiang Restricted Gene Flow for Gadus macrocephalus from Yellow Sea Based on Microsatellite Markers: Geographic Block of Tsushima Current |
title | Restricted Gene Flow for Gadus macrocephalus from Yellow Sea Based on Microsatellite Markers: Geographic Block of Tsushima Current |
title_full | Restricted Gene Flow for Gadus macrocephalus from Yellow Sea Based on Microsatellite Markers: Geographic Block of Tsushima Current |
title_fullStr | Restricted Gene Flow for Gadus macrocephalus from Yellow Sea Based on Microsatellite Markers: Geographic Block of Tsushima Current |
title_full_unstemmed | Restricted Gene Flow for Gadus macrocephalus from Yellow Sea Based on Microsatellite Markers: Geographic Block of Tsushima Current |
title_short | Restricted Gene Flow for Gadus macrocephalus from Yellow Sea Based on Microsatellite Markers: Geographic Block of Tsushima Current |
title_sort | restricted gene flow for gadus macrocephalus from yellow sea based on microsatellite markers: geographic block of tsushima current |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4848923/ https://www.ncbi.nlm.nih.gov/pubmed/27043534 http://dx.doi.org/10.3390/ijms17040467 |
work_keys_str_mv | AT songna restrictedgeneflowforgadusmacrocephalusfromyellowseabasedonmicrosatellitemarkersgeographicblockoftsushimacurrent AT liuming restrictedgeneflowforgadusmacrocephalusfromyellowseabasedonmicrosatellitemarkersgeographicblockoftsushimacurrent AT yanagimototakashi restrictedgeneflowforgadusmacrocephalusfromyellowseabasedonmicrosatellitemarkersgeographicblockoftsushimacurrent AT sakuraiyasunori restrictedgeneflowforgadusmacrocephalusfromyellowseabasedonmicrosatellitemarkersgeographicblockoftsushimacurrent AT hanzhiqiang restrictedgeneflowforgadusmacrocephalusfromyellowseabasedonmicrosatellitemarkersgeographicblockoftsushimacurrent AT gaotianxiang restrictedgeneflowforgadusmacrocephalusfromyellowseabasedonmicrosatellitemarkersgeographicblockoftsushimacurrent |