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Development and characterization of microsatellite primers in the federally endangered Astragalus bibullatus (Fabaceae)(1)

PREMISE OF THE STUDY: Microsatellites were developed for Astragalus bibullatus (Fabaceae), a federally endangered narrow endemic, to investigate reproductive ecology and species boundaries among closely related taxa. METHODS AND RESULTS: Next-generation sequencing was used to develop 12 nuclear micr...

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Detalles Bibliográficos
Autores principales: Morris, Ashley B., Scalf, Cassandra, Burleyson, Austin, Johnson, La Tonya, Trostel, Kevin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Botanical Society of America 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4850055/
https://www.ncbi.nlm.nih.gov/pubmed/27144107
http://dx.doi.org/10.3732/apps.1500126
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author Morris, Ashley B.
Scalf, Cassandra
Burleyson, Austin
Johnson, La Tonya
Trostel, Kevin
author_facet Morris, Ashley B.
Scalf, Cassandra
Burleyson, Austin
Johnson, La Tonya
Trostel, Kevin
author_sort Morris, Ashley B.
collection PubMed
description PREMISE OF THE STUDY: Microsatellites were developed for Astragalus bibullatus (Fabaceae), a federally endangered narrow endemic, to investigate reproductive ecology and species boundaries among closely related taxa. METHODS AND RESULTS: Next-generation sequencing was used to develop 12 nuclear microsatellite loci that amplify in A. bibullatus, as well as in A. crassicarpus var. trichocalyx, A. gypsodes, and A. tennesseensis. Identified loci were di- and trinucleotide repeats, with 1–15 alleles per locus. Observed and expected heterozygosities ranged from 0.000–0.938 and 0.000–0.860, respectively. Cross-amplification of three loci previously published in A. michauxii was also confirmed for the taxa included here. CONCLUSIONS: These data indicate the utility of novel microsatellite loci for conservation genetics and reproductive ecology in closely related Astragalus species.
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spelling pubmed-48500552016-05-03 Development and characterization of microsatellite primers in the federally endangered Astragalus bibullatus (Fabaceae)(1) Morris, Ashley B. Scalf, Cassandra Burleyson, Austin Johnson, La Tonya Trostel, Kevin Appl Plant Sci Primer Note PREMISE OF THE STUDY: Microsatellites were developed for Astragalus bibullatus (Fabaceae), a federally endangered narrow endemic, to investigate reproductive ecology and species boundaries among closely related taxa. METHODS AND RESULTS: Next-generation sequencing was used to develop 12 nuclear microsatellite loci that amplify in A. bibullatus, as well as in A. crassicarpus var. trichocalyx, A. gypsodes, and A. tennesseensis. Identified loci were di- and trinucleotide repeats, with 1–15 alleles per locus. Observed and expected heterozygosities ranged from 0.000–0.938 and 0.000–0.860, respectively. Cross-amplification of three loci previously published in A. michauxii was also confirmed for the taxa included here. CONCLUSIONS: These data indicate the utility of novel microsatellite loci for conservation genetics and reproductive ecology in closely related Astragalus species. Botanical Society of America 2016-04-05 /pmc/articles/PMC4850055/ /pubmed/27144107 http://dx.doi.org/10.3732/apps.1500126 Text en © 2016 Morris et al. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA).
spellingShingle Primer Note
Morris, Ashley B.
Scalf, Cassandra
Burleyson, Austin
Johnson, La Tonya
Trostel, Kevin
Development and characterization of microsatellite primers in the federally endangered Astragalus bibullatus (Fabaceae)(1)
title Development and characterization of microsatellite primers in the federally endangered Astragalus bibullatus (Fabaceae)(1)
title_full Development and characterization of microsatellite primers in the federally endangered Astragalus bibullatus (Fabaceae)(1)
title_fullStr Development and characterization of microsatellite primers in the federally endangered Astragalus bibullatus (Fabaceae)(1)
title_full_unstemmed Development and characterization of microsatellite primers in the federally endangered Astragalus bibullatus (Fabaceae)(1)
title_short Development and characterization of microsatellite primers in the federally endangered Astragalus bibullatus (Fabaceae)(1)
title_sort development and characterization of microsatellite primers in the federally endangered astragalus bibullatus (fabaceae)(1)
topic Primer Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4850055/
https://www.ncbi.nlm.nih.gov/pubmed/27144107
http://dx.doi.org/10.3732/apps.1500126
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