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Cerebellar Functional Parcellation Using Sparse Dictionary Learning Clustering
The human cerebellum has recently been discovered to contribute to cognition and emotion beyond the planning and execution of movement, suggesting its functional heterogeneity. We aimed to identify the functional parcellation of the cerebellum using information from resting-state functional magnetic...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4852537/ https://www.ncbi.nlm.nih.gov/pubmed/27199650 http://dx.doi.org/10.3389/fnins.2016.00188 |
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author | Wang, Changqing Kipping, Judy Bao, Chenglong Ji, Hui Qiu, Anqi |
author_facet | Wang, Changqing Kipping, Judy Bao, Chenglong Ji, Hui Qiu, Anqi |
author_sort | Wang, Changqing |
collection | PubMed |
description | The human cerebellum has recently been discovered to contribute to cognition and emotion beyond the planning and execution of movement, suggesting its functional heterogeneity. We aimed to identify the functional parcellation of the cerebellum using information from resting-state functional magnetic resonance imaging (rs-fMRI). For this, we introduced a new data-driven decomposition-based functional parcellation algorithm, called Sparse Dictionary Learning Clustering (SDLC). SDLC integrates dictionary learning, sparse representation of rs-fMRI, and k-means clustering into one optimization problem. The dictionary is comprised of an over-complete set of time course signals, with which a sparse representation of rs-fMRI signals can be constructed. Cerebellar functional regions were then identified using k-means clustering based on the sparse representation of rs-fMRI signals. We solved SDLC using a multi-block hybrid proximal alternating method that guarantees strong convergence. We evaluated the reliability of SDLC and benchmarked its classification accuracy against other clustering techniques using simulated data. We then demonstrated that SDLC can identify biologically reasonable functional regions of the cerebellum as estimated by their cerebello-cortical functional connectivity. We further provided new insights into the cerebello-cortical functional organization in children. |
format | Online Article Text |
id | pubmed-4852537 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-48525372016-05-19 Cerebellar Functional Parcellation Using Sparse Dictionary Learning Clustering Wang, Changqing Kipping, Judy Bao, Chenglong Ji, Hui Qiu, Anqi Front Neurosci Neuroscience The human cerebellum has recently been discovered to contribute to cognition and emotion beyond the planning and execution of movement, suggesting its functional heterogeneity. We aimed to identify the functional parcellation of the cerebellum using information from resting-state functional magnetic resonance imaging (rs-fMRI). For this, we introduced a new data-driven decomposition-based functional parcellation algorithm, called Sparse Dictionary Learning Clustering (SDLC). SDLC integrates dictionary learning, sparse representation of rs-fMRI, and k-means clustering into one optimization problem. The dictionary is comprised of an over-complete set of time course signals, with which a sparse representation of rs-fMRI signals can be constructed. Cerebellar functional regions were then identified using k-means clustering based on the sparse representation of rs-fMRI signals. We solved SDLC using a multi-block hybrid proximal alternating method that guarantees strong convergence. We evaluated the reliability of SDLC and benchmarked its classification accuracy against other clustering techniques using simulated data. We then demonstrated that SDLC can identify biologically reasonable functional regions of the cerebellum as estimated by their cerebello-cortical functional connectivity. We further provided new insights into the cerebello-cortical functional organization in children. Frontiers Media S.A. 2016-05-02 /pmc/articles/PMC4852537/ /pubmed/27199650 http://dx.doi.org/10.3389/fnins.2016.00188 Text en Copyright © 2016 Wang, Kipping, Bao, Ji and Qiu. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Wang, Changqing Kipping, Judy Bao, Chenglong Ji, Hui Qiu, Anqi Cerebellar Functional Parcellation Using Sparse Dictionary Learning Clustering |
title | Cerebellar Functional Parcellation Using Sparse Dictionary Learning Clustering |
title_full | Cerebellar Functional Parcellation Using Sparse Dictionary Learning Clustering |
title_fullStr | Cerebellar Functional Parcellation Using Sparse Dictionary Learning Clustering |
title_full_unstemmed | Cerebellar Functional Parcellation Using Sparse Dictionary Learning Clustering |
title_short | Cerebellar Functional Parcellation Using Sparse Dictionary Learning Clustering |
title_sort | cerebellar functional parcellation using sparse dictionary learning clustering |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4852537/ https://www.ncbi.nlm.nih.gov/pubmed/27199650 http://dx.doi.org/10.3389/fnins.2016.00188 |
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