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Efficient generation of FVII gene knockout mice using CRISPR/Cas9 nuclease and truncated guided RNAs

We investigated the effects of 5′-end truncated CRISPR RNA-guided Cas9 nuclease (tru-RGN, 17/18 nucleotides) on genome editing capability in NIH/3T3 cells, and its efficiencies on generating Factor VII (FVII) gene-knockout (KO) mice. In cultured cells, RGNs on-target editing activity had been varied...

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Autores principales: An, Liyou, Hu, Yeshu, Chang, Shiwei, Zhu, Xiumei, Ling, Pingping, Zhang, Fenli, Liu, Jiao, Liu, Yanhong, Chen, Yexiang, Yang, Lan, Presicce, Giorgio Antonio, Du, Fuliang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4853708/
https://www.ncbi.nlm.nih.gov/pubmed/27139777
http://dx.doi.org/10.1038/srep25199
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author An, Liyou
Hu, Yeshu
Chang, Shiwei
Zhu, Xiumei
Ling, Pingping
Zhang, Fenli
Liu, Jiao
Liu, Yanhong
Chen, Yexiang
Yang, Lan
Presicce, Giorgio Antonio
Du, Fuliang
author_facet An, Liyou
Hu, Yeshu
Chang, Shiwei
Zhu, Xiumei
Ling, Pingping
Zhang, Fenli
Liu, Jiao
Liu, Yanhong
Chen, Yexiang
Yang, Lan
Presicce, Giorgio Antonio
Du, Fuliang
author_sort An, Liyou
collection PubMed
description We investigated the effects of 5′-end truncated CRISPR RNA-guided Cas9 nuclease (tru-RGN, 17/18 nucleotides) on genome editing capability in NIH/3T3 cells, and its efficiencies on generating Factor VII (FVII) gene-knockout (KO) mice. In cultured cells, RGNs on-target editing activity had been varied when gRNAs was truncated, higher at Site Two (tF7–2 vs. F7–2, 49.5 vs. 30.1%) while lower in other two sites (Site One, tF7–1 vs.F7–1, 12.1 vs. 23.6%; Site Three, tF7–3 vs.F7–3, 7.7 vs 10.9%) (P < 0.05). Out of 15 predicated off–target sites, tru-RGNs showed significantly decreased frequencies at 5 sites. By microinjecting tru-RGN RNAs into zygotes, FVII KO mice were generated with higher efficiency at Site Two (80.1 vs. 35.8%) and Site One (55.0 vs 3.7%) (P < 0.05), but not at Site three (39.4 vs 27.8%) (P > 0.05) when compared with standard RGN controls. Knockout FVII mice demonstrated a delayed prothrombin time and decreased plasma FVII expression. Our study first demonstrates that truncated gRNAs to 18 complementary nucleotides and Cas9 nucleases, can effectively generate FVII gene KO mice with a significantly higher efficiency in a site-dependent manner. In addition, the off-target frequency was much lower in KO mice than in cell lines via RGN expression vector-mediated genome editing.
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spelling pubmed-48537082016-05-16 Efficient generation of FVII gene knockout mice using CRISPR/Cas9 nuclease and truncated guided RNAs An, Liyou Hu, Yeshu Chang, Shiwei Zhu, Xiumei Ling, Pingping Zhang, Fenli Liu, Jiao Liu, Yanhong Chen, Yexiang Yang, Lan Presicce, Giorgio Antonio Du, Fuliang Sci Rep Article We investigated the effects of 5′-end truncated CRISPR RNA-guided Cas9 nuclease (tru-RGN, 17/18 nucleotides) on genome editing capability in NIH/3T3 cells, and its efficiencies on generating Factor VII (FVII) gene-knockout (KO) mice. In cultured cells, RGNs on-target editing activity had been varied when gRNAs was truncated, higher at Site Two (tF7–2 vs. F7–2, 49.5 vs. 30.1%) while lower in other two sites (Site One, tF7–1 vs.F7–1, 12.1 vs. 23.6%; Site Three, tF7–3 vs.F7–3, 7.7 vs 10.9%) (P < 0.05). Out of 15 predicated off–target sites, tru-RGNs showed significantly decreased frequencies at 5 sites. By microinjecting tru-RGN RNAs into zygotes, FVII KO mice were generated with higher efficiency at Site Two (80.1 vs. 35.8%) and Site One (55.0 vs 3.7%) (P < 0.05), but not at Site three (39.4 vs 27.8%) (P > 0.05) when compared with standard RGN controls. Knockout FVII mice demonstrated a delayed prothrombin time and decreased plasma FVII expression. Our study first demonstrates that truncated gRNAs to 18 complementary nucleotides and Cas9 nucleases, can effectively generate FVII gene KO mice with a significantly higher efficiency in a site-dependent manner. In addition, the off-target frequency was much lower in KO mice than in cell lines via RGN expression vector-mediated genome editing. Nature Publishing Group 2016-05-03 /pmc/articles/PMC4853708/ /pubmed/27139777 http://dx.doi.org/10.1038/srep25199 Text en Copyright © 2016, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
An, Liyou
Hu, Yeshu
Chang, Shiwei
Zhu, Xiumei
Ling, Pingping
Zhang, Fenli
Liu, Jiao
Liu, Yanhong
Chen, Yexiang
Yang, Lan
Presicce, Giorgio Antonio
Du, Fuliang
Efficient generation of FVII gene knockout mice using CRISPR/Cas9 nuclease and truncated guided RNAs
title Efficient generation of FVII gene knockout mice using CRISPR/Cas9 nuclease and truncated guided RNAs
title_full Efficient generation of FVII gene knockout mice using CRISPR/Cas9 nuclease and truncated guided RNAs
title_fullStr Efficient generation of FVII gene knockout mice using CRISPR/Cas9 nuclease and truncated guided RNAs
title_full_unstemmed Efficient generation of FVII gene knockout mice using CRISPR/Cas9 nuclease and truncated guided RNAs
title_short Efficient generation of FVII gene knockout mice using CRISPR/Cas9 nuclease and truncated guided RNAs
title_sort efficient generation of fvii gene knockout mice using crispr/cas9 nuclease and truncated guided rnas
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4853708/
https://www.ncbi.nlm.nih.gov/pubmed/27139777
http://dx.doi.org/10.1038/srep25199
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