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Signal Fluctuation Sensitivity: An Improved Metric for Optimizing Detection of Resting-State fMRI Networks
Task-free connectivity analyses have emerged as a powerful tool in functional neuroimaging. Because the cross-correlations that underlie connectivity measures are sensitive to distortion of time-series, here we used a novel dynamic phantom to provide a ground truth for dynamic fidelity between blood...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4854902/ https://www.ncbi.nlm.nih.gov/pubmed/27199643 http://dx.doi.org/10.3389/fnins.2016.00180 |
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author | DeDora, Daniel J. Nedic, Sanja Katti, Pratha Arnab, Shafique Wald, Lawrence L. Takahashi, Atsushi Van Dijk, Koene R. A. Strey, Helmut H. Mujica-Parodi, Lilianne R. |
author_facet | DeDora, Daniel J. Nedic, Sanja Katti, Pratha Arnab, Shafique Wald, Lawrence L. Takahashi, Atsushi Van Dijk, Koene R. A. Strey, Helmut H. Mujica-Parodi, Lilianne R. |
author_sort | DeDora, Daniel J. |
collection | PubMed |
description | Task-free connectivity analyses have emerged as a powerful tool in functional neuroimaging. Because the cross-correlations that underlie connectivity measures are sensitive to distortion of time-series, here we used a novel dynamic phantom to provide a ground truth for dynamic fidelity between blood oxygen level dependent (BOLD)-like inputs and fMRI outputs. We found that the de facto quality-metric for task-free fMRI, temporal signal to noise ratio (tSNR), correlated inversely with dynamic fidelity; thus, studies optimized for tSNR actually produced time-series that showed the greatest distortion of signal dynamics. Instead, the phantom showed that dynamic fidelity is reasonably approximated by a measure that, unlike tSNR, dissociates signal dynamics from scanner artifact. We then tested this measure, signal fluctuation sensitivity (SFS), against human resting-state data. As predicted by the phantom, SFS—and not tSNR—is associated with enhanced sensitivity to both local and long-range connectivity within the brain's default mode network. |
format | Online Article Text |
id | pubmed-4854902 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-48549022016-05-19 Signal Fluctuation Sensitivity: An Improved Metric for Optimizing Detection of Resting-State fMRI Networks DeDora, Daniel J. Nedic, Sanja Katti, Pratha Arnab, Shafique Wald, Lawrence L. Takahashi, Atsushi Van Dijk, Koene R. A. Strey, Helmut H. Mujica-Parodi, Lilianne R. Front Neurosci Neuroscience Task-free connectivity analyses have emerged as a powerful tool in functional neuroimaging. Because the cross-correlations that underlie connectivity measures are sensitive to distortion of time-series, here we used a novel dynamic phantom to provide a ground truth for dynamic fidelity between blood oxygen level dependent (BOLD)-like inputs and fMRI outputs. We found that the de facto quality-metric for task-free fMRI, temporal signal to noise ratio (tSNR), correlated inversely with dynamic fidelity; thus, studies optimized for tSNR actually produced time-series that showed the greatest distortion of signal dynamics. Instead, the phantom showed that dynamic fidelity is reasonably approximated by a measure that, unlike tSNR, dissociates signal dynamics from scanner artifact. We then tested this measure, signal fluctuation sensitivity (SFS), against human resting-state data. As predicted by the phantom, SFS—and not tSNR—is associated with enhanced sensitivity to both local and long-range connectivity within the brain's default mode network. Frontiers Media S.A. 2016-05-04 /pmc/articles/PMC4854902/ /pubmed/27199643 http://dx.doi.org/10.3389/fnins.2016.00180 Text en Copyright © 2016 DeDora, Nedic, Katti, Arnab, Wald, Takahashi, Van Dijk, Strey and Mujica-Parodi. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience DeDora, Daniel J. Nedic, Sanja Katti, Pratha Arnab, Shafique Wald, Lawrence L. Takahashi, Atsushi Van Dijk, Koene R. A. Strey, Helmut H. Mujica-Parodi, Lilianne R. Signal Fluctuation Sensitivity: An Improved Metric for Optimizing Detection of Resting-State fMRI Networks |
title | Signal Fluctuation Sensitivity: An Improved Metric for Optimizing Detection of Resting-State fMRI Networks |
title_full | Signal Fluctuation Sensitivity: An Improved Metric for Optimizing Detection of Resting-State fMRI Networks |
title_fullStr | Signal Fluctuation Sensitivity: An Improved Metric for Optimizing Detection of Resting-State fMRI Networks |
title_full_unstemmed | Signal Fluctuation Sensitivity: An Improved Metric for Optimizing Detection of Resting-State fMRI Networks |
title_short | Signal Fluctuation Sensitivity: An Improved Metric for Optimizing Detection of Resting-State fMRI Networks |
title_sort | signal fluctuation sensitivity: an improved metric for optimizing detection of resting-state fmri networks |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4854902/ https://www.ncbi.nlm.nih.gov/pubmed/27199643 http://dx.doi.org/10.3389/fnins.2016.00180 |
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