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Unsupervised Gaussian Mixture-Model With Expectation Maximization for Detecting Glaucomatous Progression in Standard Automated Perimetry Visual Fields

PURPOSE: To validate Gaussian mixture-model with expectation maximization (GEM) and variational Bayesian independent component analysis mixture-models (VIM) for detecting glaucomatous progression along visual field (VF) defect patterns (GEM–progression of patterns (POP) and VIM-POP). To compare GEM-...

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Autores principales: Yousefi, Siamak, Balasubramanian, Madhusudhanan, Goldbaum, Michael H., Medeiros, Felipe A., Zangwill, Linda M., Weinreb, Robert N., Liebmann, Jeffrey M., Girkin, Christopher A., Bowd, Christopher
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Association for Research in Vision and Ophthalmology 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4855479/
https://www.ncbi.nlm.nih.gov/pubmed/27152250
http://dx.doi.org/10.1167/tvst.5.3.2
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author Yousefi, Siamak
Balasubramanian, Madhusudhanan
Goldbaum, Michael H.
Medeiros, Felipe A.
Zangwill, Linda M.
Weinreb, Robert N.
Liebmann, Jeffrey M.
Girkin, Christopher A.
Bowd, Christopher
author_facet Yousefi, Siamak
Balasubramanian, Madhusudhanan
Goldbaum, Michael H.
Medeiros, Felipe A.
Zangwill, Linda M.
Weinreb, Robert N.
Liebmann, Jeffrey M.
Girkin, Christopher A.
Bowd, Christopher
author_sort Yousefi, Siamak
collection PubMed
description PURPOSE: To validate Gaussian mixture-model with expectation maximization (GEM) and variational Bayesian independent component analysis mixture-models (VIM) for detecting glaucomatous progression along visual field (VF) defect patterns (GEM–progression of patterns (POP) and VIM-POP). To compare GEM-POP and VIM-POP with other methods. METHODS: GEM and VIM models separated cross-sectional abnormal VFs from 859 eyes and normal VFs from 1117 eyes into abnormal and normal clusters. Clusters were decomposed into independent axes. The confidence limit (CL) of stability was established for each axis with a set of 84 stable eyes. Sensitivity for detecting progression was assessed in a sample of 83 eyes with known progressive glaucomatous optic neuropathy (PGON). Eyes were classified as progressed if any defect pattern progressed beyond the CL of stability. Performance of GEM-POP and VIM-POP was compared to point-wise linear regression (PLR), permutation analysis of PLR (PoPLR), and linear regression (LR) of mean deviation (MD), and visual field index (VFI). RESULTS: Sensitivity and specificity for detecting glaucomatous VFs were 89.9% and 93.8%, respectively, for GEM and 93.0% and 97.0%, respectively, for VIM. Receiver operating characteristic (ROC) curve areas for classifying progressed eyes were 0.82 for VIM-POP, 0.86 for GEM-POP, 0.81 for PoPLR, 0.69 for LR of MD, and 0.76 for LR of VFI. CONCLUSIONS: GEM-POP was significantly more sensitive to PGON than PoPLR and linear regression of MD and VFI in our sample, while providing localized progression information. TRANSLATIONAL RELEVANCE: Detection of glaucomatous progression can be improved by assessing longitudinal changes in localized patterns of glaucomatous defect identified by unsupervised machine learning.
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spelling pubmed-48554792016-05-05 Unsupervised Gaussian Mixture-Model With Expectation Maximization for Detecting Glaucomatous Progression in Standard Automated Perimetry Visual Fields Yousefi, Siamak Balasubramanian, Madhusudhanan Goldbaum, Michael H. Medeiros, Felipe A. Zangwill, Linda M. Weinreb, Robert N. Liebmann, Jeffrey M. Girkin, Christopher A. Bowd, Christopher Transl Vis Sci Technol Articles PURPOSE: To validate Gaussian mixture-model with expectation maximization (GEM) and variational Bayesian independent component analysis mixture-models (VIM) for detecting glaucomatous progression along visual field (VF) defect patterns (GEM–progression of patterns (POP) and VIM-POP). To compare GEM-POP and VIM-POP with other methods. METHODS: GEM and VIM models separated cross-sectional abnormal VFs from 859 eyes and normal VFs from 1117 eyes into abnormal and normal clusters. Clusters were decomposed into independent axes. The confidence limit (CL) of stability was established for each axis with a set of 84 stable eyes. Sensitivity for detecting progression was assessed in a sample of 83 eyes with known progressive glaucomatous optic neuropathy (PGON). Eyes were classified as progressed if any defect pattern progressed beyond the CL of stability. Performance of GEM-POP and VIM-POP was compared to point-wise linear regression (PLR), permutation analysis of PLR (PoPLR), and linear regression (LR) of mean deviation (MD), and visual field index (VFI). RESULTS: Sensitivity and specificity for detecting glaucomatous VFs were 89.9% and 93.8%, respectively, for GEM and 93.0% and 97.0%, respectively, for VIM. Receiver operating characteristic (ROC) curve areas for classifying progressed eyes were 0.82 for VIM-POP, 0.86 for GEM-POP, 0.81 for PoPLR, 0.69 for LR of MD, and 0.76 for LR of VFI. CONCLUSIONS: GEM-POP was significantly more sensitive to PGON than PoPLR and linear regression of MD and VFI in our sample, while providing localized progression information. TRANSLATIONAL RELEVANCE: Detection of glaucomatous progression can be improved by assessing longitudinal changes in localized patterns of glaucomatous defect identified by unsupervised machine learning. The Association for Research in Vision and Ophthalmology 2016-05-03 /pmc/articles/PMC4855479/ /pubmed/27152250 http://dx.doi.org/10.1167/tvst.5.3.2 Text en http://creativecommons.org/licenses/by-nc-nd/4.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.
spellingShingle Articles
Yousefi, Siamak
Balasubramanian, Madhusudhanan
Goldbaum, Michael H.
Medeiros, Felipe A.
Zangwill, Linda M.
Weinreb, Robert N.
Liebmann, Jeffrey M.
Girkin, Christopher A.
Bowd, Christopher
Unsupervised Gaussian Mixture-Model With Expectation Maximization for Detecting Glaucomatous Progression in Standard Automated Perimetry Visual Fields
title Unsupervised Gaussian Mixture-Model With Expectation Maximization for Detecting Glaucomatous Progression in Standard Automated Perimetry Visual Fields
title_full Unsupervised Gaussian Mixture-Model With Expectation Maximization for Detecting Glaucomatous Progression in Standard Automated Perimetry Visual Fields
title_fullStr Unsupervised Gaussian Mixture-Model With Expectation Maximization for Detecting Glaucomatous Progression in Standard Automated Perimetry Visual Fields
title_full_unstemmed Unsupervised Gaussian Mixture-Model With Expectation Maximization for Detecting Glaucomatous Progression in Standard Automated Perimetry Visual Fields
title_short Unsupervised Gaussian Mixture-Model With Expectation Maximization for Detecting Glaucomatous Progression in Standard Automated Perimetry Visual Fields
title_sort unsupervised gaussian mixture-model with expectation maximization for detecting glaucomatous progression in standard automated perimetry visual fields
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4855479/
https://www.ncbi.nlm.nih.gov/pubmed/27152250
http://dx.doi.org/10.1167/tvst.5.3.2
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