Cargando…

The Trichoderma atroviride putative transcription factor Blu7 controls light responsiveness and tolerance

BACKGROUND: Most living organisms use sunlight as a source of energy and/or information about their environment. Consequently, they have developed mechanisms to sense light quality and quantity. In the fungus Trichoderma atroviride blue-light is perceived through the Blue Light Regulator Complex, wh...

Descripción completa

Detalles Bibliográficos
Autores principales: Cetz-Chel, José E., Balcázar-López, Edgar, Esquivel-Naranjo, Edgardo U., Herrera-Estrella, Alfredo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4855978/
https://www.ncbi.nlm.nih.gov/pubmed/27142227
http://dx.doi.org/10.1186/s12864-016-2639-9
_version_ 1782430444145344512
author Cetz-Chel, José E.
Balcázar-López, Edgar
Esquivel-Naranjo, Edgardo U.
Herrera-Estrella, Alfredo
author_facet Cetz-Chel, José E.
Balcázar-López, Edgar
Esquivel-Naranjo, Edgardo U.
Herrera-Estrella, Alfredo
author_sort Cetz-Chel, José E.
collection PubMed
description BACKGROUND: Most living organisms use sunlight as a source of energy and/or information about their environment. Consequently, they have developed mechanisms to sense light quality and quantity. In the fungus Trichoderma atroviride blue-light is perceived through the Blue Light Regulator Complex, which in turn up-regulates a set of genes (blu) and down-regulates another set (bld), triggering asexual reproduction. To gain insight into this process, we characterized the blu7 gene, which encodes a protein containing a C2H2 zinc finger domain. RESULTS: Δblu7 mutants show reduced conidiation at low light fluences, which is still clear even when exposed to saturating light. For the first time we show a genome wide survey of light regulated gene expression in T. atroviride, including RNA-seq analyses of the wild type and the Δblu7 strains after brief exposure to blue-light. Our data show a reduction in the number of induced genes and an increase in down-regulated genes in the mutant. Light activates stress responses and several metabolic processes in the wild type strain that are no longer activated in the mutant. In agreement with the misregulation of metabolic processes, continuous exposure to white light strongly inhibited growth of the ∆blu7 mutant, in a carbon source dependent fashion. RNA-seq analyses under constant white light using glucose as sole carbon source revealed that localization and transport process present the opposite regulation pattern in the ∆blu7 and wild type strains. Genes related to amino acid, sugar and general transporters were enriched in the induced genes in the mutant and the repressed genes of the wild type. Peptone supplemented in the media restored growth of the ∆blu7 mutant in constant light, suggesting a role of Blu7 in the regulation of nitrogen metabolism in the presence of light. CONCLUSIONS: Blu7 appears to regulate light sensitivity in terms of induction of conidiation, and to play a major role in supporting growth under continuous exposure to light. The diminished conidiation observed in ∆blu7 mutants is likely due to misregulation of the cAMP signaling pathway and ROS production, whereas their low tolerance to continuous exposure to light indicates that Blu7 is required for adaptation. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12864-016-2639-9) contains supplementary material, which is available to authorized users.
format Online
Article
Text
id pubmed-4855978
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-48559782016-05-05 The Trichoderma atroviride putative transcription factor Blu7 controls light responsiveness and tolerance Cetz-Chel, José E. Balcázar-López, Edgar Esquivel-Naranjo, Edgardo U. Herrera-Estrella, Alfredo BMC Genomics Research Article BACKGROUND: Most living organisms use sunlight as a source of energy and/or information about their environment. Consequently, they have developed mechanisms to sense light quality and quantity. In the fungus Trichoderma atroviride blue-light is perceived through the Blue Light Regulator Complex, which in turn up-regulates a set of genes (blu) and down-regulates another set (bld), triggering asexual reproduction. To gain insight into this process, we characterized the blu7 gene, which encodes a protein containing a C2H2 zinc finger domain. RESULTS: Δblu7 mutants show reduced conidiation at low light fluences, which is still clear even when exposed to saturating light. For the first time we show a genome wide survey of light regulated gene expression in T. atroviride, including RNA-seq analyses of the wild type and the Δblu7 strains after brief exposure to blue-light. Our data show a reduction in the number of induced genes and an increase in down-regulated genes in the mutant. Light activates stress responses and several metabolic processes in the wild type strain that are no longer activated in the mutant. In agreement with the misregulation of metabolic processes, continuous exposure to white light strongly inhibited growth of the ∆blu7 mutant, in a carbon source dependent fashion. RNA-seq analyses under constant white light using glucose as sole carbon source revealed that localization and transport process present the opposite regulation pattern in the ∆blu7 and wild type strains. Genes related to amino acid, sugar and general transporters were enriched in the induced genes in the mutant and the repressed genes of the wild type. Peptone supplemented in the media restored growth of the ∆blu7 mutant in constant light, suggesting a role of Blu7 in the regulation of nitrogen metabolism in the presence of light. CONCLUSIONS: Blu7 appears to regulate light sensitivity in terms of induction of conidiation, and to play a major role in supporting growth under continuous exposure to light. The diminished conidiation observed in ∆blu7 mutants is likely due to misregulation of the cAMP signaling pathway and ROS production, whereas their low tolerance to continuous exposure to light indicates that Blu7 is required for adaptation. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12864-016-2639-9) contains supplementary material, which is available to authorized users. BioMed Central 2016-05-04 /pmc/articles/PMC4855978/ /pubmed/27142227 http://dx.doi.org/10.1186/s12864-016-2639-9 Text en © Cetz-Chel et al. 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Cetz-Chel, José E.
Balcázar-López, Edgar
Esquivel-Naranjo, Edgardo U.
Herrera-Estrella, Alfredo
The Trichoderma atroviride putative transcription factor Blu7 controls light responsiveness and tolerance
title The Trichoderma atroviride putative transcription factor Blu7 controls light responsiveness and tolerance
title_full The Trichoderma atroviride putative transcription factor Blu7 controls light responsiveness and tolerance
title_fullStr The Trichoderma atroviride putative transcription factor Blu7 controls light responsiveness and tolerance
title_full_unstemmed The Trichoderma atroviride putative transcription factor Blu7 controls light responsiveness and tolerance
title_short The Trichoderma atroviride putative transcription factor Blu7 controls light responsiveness and tolerance
title_sort trichoderma atroviride putative transcription factor blu7 controls light responsiveness and tolerance
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4855978/
https://www.ncbi.nlm.nih.gov/pubmed/27142227
http://dx.doi.org/10.1186/s12864-016-2639-9
work_keys_str_mv AT cetzcheljosee thetrichodermaatrovirideputativetranscriptionfactorblu7controlslightresponsivenessandtolerance
AT balcazarlopezedgar thetrichodermaatrovirideputativetranscriptionfactorblu7controlslightresponsivenessandtolerance
AT esquivelnaranjoedgardou thetrichodermaatrovirideputativetranscriptionfactorblu7controlslightresponsivenessandtolerance
AT herreraestrellaalfredo thetrichodermaatrovirideputativetranscriptionfactorblu7controlslightresponsivenessandtolerance
AT cetzcheljosee trichodermaatrovirideputativetranscriptionfactorblu7controlslightresponsivenessandtolerance
AT balcazarlopezedgar trichodermaatrovirideputativetranscriptionfactorblu7controlslightresponsivenessandtolerance
AT esquivelnaranjoedgardou trichodermaatrovirideputativetranscriptionfactorblu7controlslightresponsivenessandtolerance
AT herreraestrellaalfredo trichodermaatrovirideputativetranscriptionfactorblu7controlslightresponsivenessandtolerance