Cargando…

Quantitative RT-PCR Gene Evaluation and RNA Interference in the Brown Marmorated Stink Bug

The brown marmorated stink bug (Halyomorpha halys) has emerged as one of the most important invasive insect pests in the United States. Functional genomics in H. halys remains unexplored as molecular resources in this insect have recently been developed. To facilitate functional genomics research, w...

Descripción completa

Detalles Bibliográficos
Autores principales: Bansal, Raman, Mittapelly, Priyanka, Chen, Yuting, Mamidala, Praveen, Zhao, Chaoyang, Michel, Andy
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4856283/
https://www.ncbi.nlm.nih.gov/pubmed/27144586
http://dx.doi.org/10.1371/journal.pone.0152730
_version_ 1782430481135960064
author Bansal, Raman
Mittapelly, Priyanka
Chen, Yuting
Mamidala, Praveen
Zhao, Chaoyang
Michel, Andy
author_facet Bansal, Raman
Mittapelly, Priyanka
Chen, Yuting
Mamidala, Praveen
Zhao, Chaoyang
Michel, Andy
author_sort Bansal, Raman
collection PubMed
description The brown marmorated stink bug (Halyomorpha halys) has emerged as one of the most important invasive insect pests in the United States. Functional genomics in H. halys remains unexplored as molecular resources in this insect have recently been developed. To facilitate functional genomics research, we evaluated ten common insect housekeeping genes (RPS26, EF1A, FAU, UBE4A, ARL2, ARP8, GUS, TBP, TIF6 and RPL9) for their stability across various treatments in H. halys. Our treatments included two biotic factors (tissues and developmental stages) and two stress treatments (RNAi injection and starvation). Reference gene stability was determined using three software algorithms (geNorm, NormFinder, BestKeeper) and a web-based tool (RefFinder). The qRT-PCR results indicated ARP8 and UBE4A exhibit the most stable expression across tissues and developmental stages, ARL2 and FAU for dsRNA treatment and TBP and UBE4A for starvation treatment. Following the dsRNA treatment, all genes except GUS showed relatively stable expression. To demonstrate the utility of validated reference genes in accurate gene expression analysis and to explore gene silencing in H. halys, we performed RNAi by administering dsRNA of target gene (catalase) through microinjection. A successful RNAi response with over 90% reduction in expression of target gene was observed.
format Online
Article
Text
id pubmed-4856283
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-48562832016-05-07 Quantitative RT-PCR Gene Evaluation and RNA Interference in the Brown Marmorated Stink Bug Bansal, Raman Mittapelly, Priyanka Chen, Yuting Mamidala, Praveen Zhao, Chaoyang Michel, Andy PLoS One Research Article The brown marmorated stink bug (Halyomorpha halys) has emerged as one of the most important invasive insect pests in the United States. Functional genomics in H. halys remains unexplored as molecular resources in this insect have recently been developed. To facilitate functional genomics research, we evaluated ten common insect housekeeping genes (RPS26, EF1A, FAU, UBE4A, ARL2, ARP8, GUS, TBP, TIF6 and RPL9) for their stability across various treatments in H. halys. Our treatments included two biotic factors (tissues and developmental stages) and two stress treatments (RNAi injection and starvation). Reference gene stability was determined using three software algorithms (geNorm, NormFinder, BestKeeper) and a web-based tool (RefFinder). The qRT-PCR results indicated ARP8 and UBE4A exhibit the most stable expression across tissues and developmental stages, ARL2 and FAU for dsRNA treatment and TBP and UBE4A for starvation treatment. Following the dsRNA treatment, all genes except GUS showed relatively stable expression. To demonstrate the utility of validated reference genes in accurate gene expression analysis and to explore gene silencing in H. halys, we performed RNAi by administering dsRNA of target gene (catalase) through microinjection. A successful RNAi response with over 90% reduction in expression of target gene was observed. Public Library of Science 2016-05-04 /pmc/articles/PMC4856283/ /pubmed/27144586 http://dx.doi.org/10.1371/journal.pone.0152730 Text en © 2016 Bansal et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Bansal, Raman
Mittapelly, Priyanka
Chen, Yuting
Mamidala, Praveen
Zhao, Chaoyang
Michel, Andy
Quantitative RT-PCR Gene Evaluation and RNA Interference in the Brown Marmorated Stink Bug
title Quantitative RT-PCR Gene Evaluation and RNA Interference in the Brown Marmorated Stink Bug
title_full Quantitative RT-PCR Gene Evaluation and RNA Interference in the Brown Marmorated Stink Bug
title_fullStr Quantitative RT-PCR Gene Evaluation and RNA Interference in the Brown Marmorated Stink Bug
title_full_unstemmed Quantitative RT-PCR Gene Evaluation and RNA Interference in the Brown Marmorated Stink Bug
title_short Quantitative RT-PCR Gene Evaluation and RNA Interference in the Brown Marmorated Stink Bug
title_sort quantitative rt-pcr gene evaluation and rna interference in the brown marmorated stink bug
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4856283/
https://www.ncbi.nlm.nih.gov/pubmed/27144586
http://dx.doi.org/10.1371/journal.pone.0152730
work_keys_str_mv AT bansalraman quantitativertpcrgeneevaluationandrnainterferenceinthebrownmarmoratedstinkbug
AT mittapellypriyanka quantitativertpcrgeneevaluationandrnainterferenceinthebrownmarmoratedstinkbug
AT chenyuting quantitativertpcrgeneevaluationandrnainterferenceinthebrownmarmoratedstinkbug
AT mamidalapraveen quantitativertpcrgeneevaluationandrnainterferenceinthebrownmarmoratedstinkbug
AT zhaochaoyang quantitativertpcrgeneevaluationandrnainterferenceinthebrownmarmoratedstinkbug
AT michelandy quantitativertpcrgeneevaluationandrnainterferenceinthebrownmarmoratedstinkbug