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Quantitative RT-PCR Gene Evaluation and RNA Interference in the Brown Marmorated Stink Bug
The brown marmorated stink bug (Halyomorpha halys) has emerged as one of the most important invasive insect pests in the United States. Functional genomics in H. halys remains unexplored as molecular resources in this insect have recently been developed. To facilitate functional genomics research, w...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4856283/ https://www.ncbi.nlm.nih.gov/pubmed/27144586 http://dx.doi.org/10.1371/journal.pone.0152730 |
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author | Bansal, Raman Mittapelly, Priyanka Chen, Yuting Mamidala, Praveen Zhao, Chaoyang Michel, Andy |
author_facet | Bansal, Raman Mittapelly, Priyanka Chen, Yuting Mamidala, Praveen Zhao, Chaoyang Michel, Andy |
author_sort | Bansal, Raman |
collection | PubMed |
description | The brown marmorated stink bug (Halyomorpha halys) has emerged as one of the most important invasive insect pests in the United States. Functional genomics in H. halys remains unexplored as molecular resources in this insect have recently been developed. To facilitate functional genomics research, we evaluated ten common insect housekeeping genes (RPS26, EF1A, FAU, UBE4A, ARL2, ARP8, GUS, TBP, TIF6 and RPL9) for their stability across various treatments in H. halys. Our treatments included two biotic factors (tissues and developmental stages) and two stress treatments (RNAi injection and starvation). Reference gene stability was determined using three software algorithms (geNorm, NormFinder, BestKeeper) and a web-based tool (RefFinder). The qRT-PCR results indicated ARP8 and UBE4A exhibit the most stable expression across tissues and developmental stages, ARL2 and FAU for dsRNA treatment and TBP and UBE4A for starvation treatment. Following the dsRNA treatment, all genes except GUS showed relatively stable expression. To demonstrate the utility of validated reference genes in accurate gene expression analysis and to explore gene silencing in H. halys, we performed RNAi by administering dsRNA of target gene (catalase) through microinjection. A successful RNAi response with over 90% reduction in expression of target gene was observed. |
format | Online Article Text |
id | pubmed-4856283 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-48562832016-05-07 Quantitative RT-PCR Gene Evaluation and RNA Interference in the Brown Marmorated Stink Bug Bansal, Raman Mittapelly, Priyanka Chen, Yuting Mamidala, Praveen Zhao, Chaoyang Michel, Andy PLoS One Research Article The brown marmorated stink bug (Halyomorpha halys) has emerged as one of the most important invasive insect pests in the United States. Functional genomics in H. halys remains unexplored as molecular resources in this insect have recently been developed. To facilitate functional genomics research, we evaluated ten common insect housekeeping genes (RPS26, EF1A, FAU, UBE4A, ARL2, ARP8, GUS, TBP, TIF6 and RPL9) for their stability across various treatments in H. halys. Our treatments included two biotic factors (tissues and developmental stages) and two stress treatments (RNAi injection and starvation). Reference gene stability was determined using three software algorithms (geNorm, NormFinder, BestKeeper) and a web-based tool (RefFinder). The qRT-PCR results indicated ARP8 and UBE4A exhibit the most stable expression across tissues and developmental stages, ARL2 and FAU for dsRNA treatment and TBP and UBE4A for starvation treatment. Following the dsRNA treatment, all genes except GUS showed relatively stable expression. To demonstrate the utility of validated reference genes in accurate gene expression analysis and to explore gene silencing in H. halys, we performed RNAi by administering dsRNA of target gene (catalase) through microinjection. A successful RNAi response with over 90% reduction in expression of target gene was observed. Public Library of Science 2016-05-04 /pmc/articles/PMC4856283/ /pubmed/27144586 http://dx.doi.org/10.1371/journal.pone.0152730 Text en © 2016 Bansal et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Bansal, Raman Mittapelly, Priyanka Chen, Yuting Mamidala, Praveen Zhao, Chaoyang Michel, Andy Quantitative RT-PCR Gene Evaluation and RNA Interference in the Brown Marmorated Stink Bug |
title | Quantitative RT-PCR Gene Evaluation and RNA Interference in the Brown Marmorated Stink Bug |
title_full | Quantitative RT-PCR Gene Evaluation and RNA Interference in the Brown Marmorated Stink Bug |
title_fullStr | Quantitative RT-PCR Gene Evaluation and RNA Interference in the Brown Marmorated Stink Bug |
title_full_unstemmed | Quantitative RT-PCR Gene Evaluation and RNA Interference in the Brown Marmorated Stink Bug |
title_short | Quantitative RT-PCR Gene Evaluation and RNA Interference in the Brown Marmorated Stink Bug |
title_sort | quantitative rt-pcr gene evaluation and rna interference in the brown marmorated stink bug |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4856283/ https://www.ncbi.nlm.nih.gov/pubmed/27144586 http://dx.doi.org/10.1371/journal.pone.0152730 |
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