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PCOSDB: PolyCystic Ovary Syndrome Database for manually curated disease associated genes

Polycystic ovary syndrome (PCOS) is a complex disorder affecting approximately 5–10 percent of all women of reproductive age. It is a multi-factorial endocrine disorder, which demonstrates menstrual disturbance, infertility, anovulation, hirsutism, hyper androgenism and others. It has been indicated...

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Autores principales: Jesintha Mary, Maniraja, Vetrivel, Umashankar, Munuswamy, Deecaraman, Melanathuru, Vijayalakshmi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Biomedical Informatics 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4857457/
https://www.ncbi.nlm.nih.gov/pubmed/27212836
http://dx.doi.org/10.6026/97320630012004
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author Jesintha Mary, Maniraja
Vetrivel, Umashankar
Munuswamy, Deecaraman
Melanathuru, Vijayalakshmi
author_facet Jesintha Mary, Maniraja
Vetrivel, Umashankar
Munuswamy, Deecaraman
Melanathuru, Vijayalakshmi
author_sort Jesintha Mary, Maniraja
collection PubMed
description Polycystic ovary syndrome (PCOS) is a complex disorder affecting approximately 5–10 percent of all women of reproductive age. It is a multi-factorial endocrine disorder, which demonstrates menstrual disturbance, infertility, anovulation, hirsutism, hyper androgenism and others. It has been indicated that differential expression of genes, genetic level variations, and other molecular alterations interplay in PCOS and are the target sites for clinical applications. Therefore, integrating the PCOS-associated genes along with its alteration and underpinning the underlying mechanism might definitely provide valuable information to understand the disease mechanism. We manually curated the information from 234 published literatures, including gene, molecular alteration, details of association, significance of association, ethnicity, age, drug, and other annotated summaries. PCOSDB is an online resource that brings comprehensive information about the disease, and the implication of various genes and its mechanism. We present the curated information from peer reviewed literatures, and organized the information at various levels including differentially expressed genes in PCOS, genetic variations such as polymorphisms, mutations causing PCOS across various ethnicities. We have covered both significant and non-significant associations along with conflicting studies. PCOSDB v1.0 contains 208 gene reports, 427 molecular alterations, and 46 phenotypes associated with PCOS
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spelling pubmed-48574572016-05-20 PCOSDB: PolyCystic Ovary Syndrome Database for manually curated disease associated genes Jesintha Mary, Maniraja Vetrivel, Umashankar Munuswamy, Deecaraman Melanathuru, Vijayalakshmi Bioinformation Database Polycystic ovary syndrome (PCOS) is a complex disorder affecting approximately 5–10 percent of all women of reproductive age. It is a multi-factorial endocrine disorder, which demonstrates menstrual disturbance, infertility, anovulation, hirsutism, hyper androgenism and others. It has been indicated that differential expression of genes, genetic level variations, and other molecular alterations interplay in PCOS and are the target sites for clinical applications. Therefore, integrating the PCOS-associated genes along with its alteration and underpinning the underlying mechanism might definitely provide valuable information to understand the disease mechanism. We manually curated the information from 234 published literatures, including gene, molecular alteration, details of association, significance of association, ethnicity, age, drug, and other annotated summaries. PCOSDB is an online resource that brings comprehensive information about the disease, and the implication of various genes and its mechanism. We present the curated information from peer reviewed literatures, and organized the information at various levels including differentially expressed genes in PCOS, genetic variations such as polymorphisms, mutations causing PCOS across various ethnicities. We have covered both significant and non-significant associations along with conflicting studies. PCOSDB v1.0 contains 208 gene reports, 427 molecular alterations, and 46 phenotypes associated with PCOS Biomedical Informatics 2016-01-31 /pmc/articles/PMC4857457/ /pubmed/27212836 http://dx.doi.org/10.6026/97320630012004 Text en © 2016 Biomedical Informatics This is an Open Access article which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. This is distributed under the terms of the Creative Commons Attribution License.
spellingShingle Database
Jesintha Mary, Maniraja
Vetrivel, Umashankar
Munuswamy, Deecaraman
Melanathuru, Vijayalakshmi
PCOSDB: PolyCystic Ovary Syndrome Database for manually curated disease associated genes
title PCOSDB: PolyCystic Ovary Syndrome Database for manually curated disease associated genes
title_full PCOSDB: PolyCystic Ovary Syndrome Database for manually curated disease associated genes
title_fullStr PCOSDB: PolyCystic Ovary Syndrome Database for manually curated disease associated genes
title_full_unstemmed PCOSDB: PolyCystic Ovary Syndrome Database for manually curated disease associated genes
title_short PCOSDB: PolyCystic Ovary Syndrome Database for manually curated disease associated genes
title_sort pcosdb: polycystic ovary syndrome database for manually curated disease associated genes
topic Database
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4857457/
https://www.ncbi.nlm.nih.gov/pubmed/27212836
http://dx.doi.org/10.6026/97320630012004
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