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Ultrasonic acoustic levitation for fast frame rate X-ray protein crystallography at room temperature

Increasing the data acquisition rate of X-ray diffraction images for macromolecular crystals at room temperature at synchrotrons has the potential to significantly accelerate both structural analysis of biomolecules and structure-based drug developments. Using lysozyme model crystals, we demonstrate...

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Detalles Bibliográficos
Autores principales: Tsujino, Soichiro, Tomizaki, Takashi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4858681/
https://www.ncbi.nlm.nih.gov/pubmed/27150272
http://dx.doi.org/10.1038/srep25558
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author Tsujino, Soichiro
Tomizaki, Takashi
author_facet Tsujino, Soichiro
Tomizaki, Takashi
author_sort Tsujino, Soichiro
collection PubMed
description Increasing the data acquisition rate of X-ray diffraction images for macromolecular crystals at room temperature at synchrotrons has the potential to significantly accelerate both structural analysis of biomolecules and structure-based drug developments. Using lysozyme model crystals, we demonstrated the rapid acquisition of X-ray diffraction datasets by combining a high frame rate pixel array detector with ultrasonic acoustic levitation of protein crystals in liquid droplets. The rapid spinning of the crystal within a levitating droplet ensured an efficient sampling of the reciprocal space. The datasets were processed with a program suite developed for serial femtosecond crystallography (SFX). The structure, which was solved by molecular replacement, was found to be identical to the structure obtained by the conventional oscillation method for up to a 1.8-Å resolution limit. In particular, the absence of protein crystal damage resulting from the acoustic levitation was carefully established. These results represent a key step towards a fully automated sample handling and measurement pipeline, which has promising prospects for a high acquisition rate and high sample efficiency for room temperature X-ray crystallography.
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spelling pubmed-48586812016-05-19 Ultrasonic acoustic levitation for fast frame rate X-ray protein crystallography at room temperature Tsujino, Soichiro Tomizaki, Takashi Sci Rep Article Increasing the data acquisition rate of X-ray diffraction images for macromolecular crystals at room temperature at synchrotrons has the potential to significantly accelerate both structural analysis of biomolecules and structure-based drug developments. Using lysozyme model crystals, we demonstrated the rapid acquisition of X-ray diffraction datasets by combining a high frame rate pixel array detector with ultrasonic acoustic levitation of protein crystals in liquid droplets. The rapid spinning of the crystal within a levitating droplet ensured an efficient sampling of the reciprocal space. The datasets were processed with a program suite developed for serial femtosecond crystallography (SFX). The structure, which was solved by molecular replacement, was found to be identical to the structure obtained by the conventional oscillation method for up to a 1.8-Å resolution limit. In particular, the absence of protein crystal damage resulting from the acoustic levitation was carefully established. These results represent a key step towards a fully automated sample handling and measurement pipeline, which has promising prospects for a high acquisition rate and high sample efficiency for room temperature X-ray crystallography. Nature Publishing Group 2016-05-06 /pmc/articles/PMC4858681/ /pubmed/27150272 http://dx.doi.org/10.1038/srep25558 Text en Copyright © 2016, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Tsujino, Soichiro
Tomizaki, Takashi
Ultrasonic acoustic levitation for fast frame rate X-ray protein crystallography at room temperature
title Ultrasonic acoustic levitation for fast frame rate X-ray protein crystallography at room temperature
title_full Ultrasonic acoustic levitation for fast frame rate X-ray protein crystallography at room temperature
title_fullStr Ultrasonic acoustic levitation for fast frame rate X-ray protein crystallography at room temperature
title_full_unstemmed Ultrasonic acoustic levitation for fast frame rate X-ray protein crystallography at room temperature
title_short Ultrasonic acoustic levitation for fast frame rate X-ray protein crystallography at room temperature
title_sort ultrasonic acoustic levitation for fast frame rate x-ray protein crystallography at room temperature
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4858681/
https://www.ncbi.nlm.nih.gov/pubmed/27150272
http://dx.doi.org/10.1038/srep25558
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