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Ultrasonic acoustic levitation for fast frame rate X-ray protein crystallography at room temperature
Increasing the data acquisition rate of X-ray diffraction images for macromolecular crystals at room temperature at synchrotrons has the potential to significantly accelerate both structural analysis of biomolecules and structure-based drug developments. Using lysozyme model crystals, we demonstrate...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4858681/ https://www.ncbi.nlm.nih.gov/pubmed/27150272 http://dx.doi.org/10.1038/srep25558 |
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author | Tsujino, Soichiro Tomizaki, Takashi |
author_facet | Tsujino, Soichiro Tomizaki, Takashi |
author_sort | Tsujino, Soichiro |
collection | PubMed |
description | Increasing the data acquisition rate of X-ray diffraction images for macromolecular crystals at room temperature at synchrotrons has the potential to significantly accelerate both structural analysis of biomolecules and structure-based drug developments. Using lysozyme model crystals, we demonstrated the rapid acquisition of X-ray diffraction datasets by combining a high frame rate pixel array detector with ultrasonic acoustic levitation of protein crystals in liquid droplets. The rapid spinning of the crystal within a levitating droplet ensured an efficient sampling of the reciprocal space. The datasets were processed with a program suite developed for serial femtosecond crystallography (SFX). The structure, which was solved by molecular replacement, was found to be identical to the structure obtained by the conventional oscillation method for up to a 1.8-Å resolution limit. In particular, the absence of protein crystal damage resulting from the acoustic levitation was carefully established. These results represent a key step towards a fully automated sample handling and measurement pipeline, which has promising prospects for a high acquisition rate and high sample efficiency for room temperature X-ray crystallography. |
format | Online Article Text |
id | pubmed-4858681 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-48586812016-05-19 Ultrasonic acoustic levitation for fast frame rate X-ray protein crystallography at room temperature Tsujino, Soichiro Tomizaki, Takashi Sci Rep Article Increasing the data acquisition rate of X-ray diffraction images for macromolecular crystals at room temperature at synchrotrons has the potential to significantly accelerate both structural analysis of biomolecules and structure-based drug developments. Using lysozyme model crystals, we demonstrated the rapid acquisition of X-ray diffraction datasets by combining a high frame rate pixel array detector with ultrasonic acoustic levitation of protein crystals in liquid droplets. The rapid spinning of the crystal within a levitating droplet ensured an efficient sampling of the reciprocal space. The datasets were processed with a program suite developed for serial femtosecond crystallography (SFX). The structure, which was solved by molecular replacement, was found to be identical to the structure obtained by the conventional oscillation method for up to a 1.8-Å resolution limit. In particular, the absence of protein crystal damage resulting from the acoustic levitation was carefully established. These results represent a key step towards a fully automated sample handling and measurement pipeline, which has promising prospects for a high acquisition rate and high sample efficiency for room temperature X-ray crystallography. Nature Publishing Group 2016-05-06 /pmc/articles/PMC4858681/ /pubmed/27150272 http://dx.doi.org/10.1038/srep25558 Text en Copyright © 2016, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Tsujino, Soichiro Tomizaki, Takashi Ultrasonic acoustic levitation for fast frame rate X-ray protein crystallography at room temperature |
title | Ultrasonic acoustic levitation for fast frame rate X-ray protein crystallography at room temperature |
title_full | Ultrasonic acoustic levitation for fast frame rate X-ray protein crystallography at room temperature |
title_fullStr | Ultrasonic acoustic levitation for fast frame rate X-ray protein crystallography at room temperature |
title_full_unstemmed | Ultrasonic acoustic levitation for fast frame rate X-ray protein crystallography at room temperature |
title_short | Ultrasonic acoustic levitation for fast frame rate X-ray protein crystallography at room temperature |
title_sort | ultrasonic acoustic levitation for fast frame rate x-ray protein crystallography at room temperature |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4858681/ https://www.ncbi.nlm.nih.gov/pubmed/27150272 http://dx.doi.org/10.1038/srep25558 |
work_keys_str_mv | AT tsujinosoichiro ultrasonicacousticlevitationforfastframeratexrayproteincrystallographyatroomtemperature AT tomizakitakashi ultrasonicacousticlevitationforfastframeratexrayproteincrystallographyatroomtemperature |