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Automatic Three-dimensional Detection of Photoreceptor Ellipsoid Zone Disruption Caused by Trauma in the OCT
Detection and assessment of the integrity of the photoreceptor ellipsoid zone (EZ) are important because it is critical for visual acuity in retina trauma and other diseases. We have proposed and validated a framework that can automatically analyse the 3D integrity of the EZ in optical coherence tom...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4860566/ https://www.ncbi.nlm.nih.gov/pubmed/27157473 http://dx.doi.org/10.1038/srep25433 |
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author | Zhu, Weifang Chen, Haoyu Zhao, Heming Tian, Bei Wang, Lirong Shi, Fei Xiang, Dehui Luo, Xiaohong Gao, Enting Zhang, Li Yin, Yilong Chen, Xinjian |
author_facet | Zhu, Weifang Chen, Haoyu Zhao, Heming Tian, Bei Wang, Lirong Shi, Fei Xiang, Dehui Luo, Xiaohong Gao, Enting Zhang, Li Yin, Yilong Chen, Xinjian |
author_sort | Zhu, Weifang |
collection | PubMed |
description | Detection and assessment of the integrity of the photoreceptor ellipsoid zone (EZ) are important because it is critical for visual acuity in retina trauma and other diseases. We have proposed and validated a framework that can automatically analyse the 3D integrity of the EZ in optical coherence tomography (OCT) images. The images are first filtered and automatically segmented into 10 layers, of which EZ is located in the 7(th) layer. For each voxel of the EZ, 57 features are extracted and a principle component analysis is performed to optimize the features. An Adaboost classifier is trained to classify each voxel of the EZ as disrupted or non-disrupted. Finally, blood vessel silhouettes and isolated points are excluded. To demonstrate its effectiveness, the proposed framework was tested on 15 eyes with retinal trauma and 15 normal eyes. For the eyes with retinal trauma, the sensitivity (SEN) was 85.69% ± 9.59%, the specificity (SPE) was 85.91% ± 5.48%, and the balanced accuracy rate (BAR) was 85.80% ± 6.16%. For the normal eyes, the SPE was 99.03% ± 0.73%, and the SEN and BAR levels were not relevant. Our framework has the potential to become a useful tool for studying retina trauma and other conditions involving EZ integrity. |
format | Online Article Text |
id | pubmed-4860566 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-48605662016-05-20 Automatic Three-dimensional Detection of Photoreceptor Ellipsoid Zone Disruption Caused by Trauma in the OCT Zhu, Weifang Chen, Haoyu Zhao, Heming Tian, Bei Wang, Lirong Shi, Fei Xiang, Dehui Luo, Xiaohong Gao, Enting Zhang, Li Yin, Yilong Chen, Xinjian Sci Rep Article Detection and assessment of the integrity of the photoreceptor ellipsoid zone (EZ) are important because it is critical for visual acuity in retina trauma and other diseases. We have proposed and validated a framework that can automatically analyse the 3D integrity of the EZ in optical coherence tomography (OCT) images. The images are first filtered and automatically segmented into 10 layers, of which EZ is located in the 7(th) layer. For each voxel of the EZ, 57 features are extracted and a principle component analysis is performed to optimize the features. An Adaboost classifier is trained to classify each voxel of the EZ as disrupted or non-disrupted. Finally, blood vessel silhouettes and isolated points are excluded. To demonstrate its effectiveness, the proposed framework was tested on 15 eyes with retinal trauma and 15 normal eyes. For the eyes with retinal trauma, the sensitivity (SEN) was 85.69% ± 9.59%, the specificity (SPE) was 85.91% ± 5.48%, and the balanced accuracy rate (BAR) was 85.80% ± 6.16%. For the normal eyes, the SPE was 99.03% ± 0.73%, and the SEN and BAR levels were not relevant. Our framework has the potential to become a useful tool for studying retina trauma and other conditions involving EZ integrity. Nature Publishing Group 2016-05-09 /pmc/articles/PMC4860566/ /pubmed/27157473 http://dx.doi.org/10.1038/srep25433 Text en Copyright © 2016, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Zhu, Weifang Chen, Haoyu Zhao, Heming Tian, Bei Wang, Lirong Shi, Fei Xiang, Dehui Luo, Xiaohong Gao, Enting Zhang, Li Yin, Yilong Chen, Xinjian Automatic Three-dimensional Detection of Photoreceptor Ellipsoid Zone Disruption Caused by Trauma in the OCT |
title | Automatic Three-dimensional Detection of Photoreceptor Ellipsoid Zone Disruption Caused by Trauma in the OCT |
title_full | Automatic Three-dimensional Detection of Photoreceptor Ellipsoid Zone Disruption Caused by Trauma in the OCT |
title_fullStr | Automatic Three-dimensional Detection of Photoreceptor Ellipsoid Zone Disruption Caused by Trauma in the OCT |
title_full_unstemmed | Automatic Three-dimensional Detection of Photoreceptor Ellipsoid Zone Disruption Caused by Trauma in the OCT |
title_short | Automatic Three-dimensional Detection of Photoreceptor Ellipsoid Zone Disruption Caused by Trauma in the OCT |
title_sort | automatic three-dimensional detection of photoreceptor ellipsoid zone disruption caused by trauma in the oct |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4860566/ https://www.ncbi.nlm.nih.gov/pubmed/27157473 http://dx.doi.org/10.1038/srep25433 |
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