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Molecular mutation profile of pfcrt in Plasmodium falciparum isolates imported from Africa in Henan province

BACKGROUND: Anti-malarial drug resistance is a primary public health problem. Haplotypes of pfcrt gene have been implicated to be molecular markers of chloroquine (CQ) resistance. This study aims to explore the prevalence of polymorphisms in pfcrt in Plasmodium falciparum-infected patients imported...

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Autores principales: Zhou, Rui-min, Zhang, Hong-wei, Yang, Cheng-yun, Liu, Ying, Zhao, Yu-ling, Li, Su-hua, Qian, Dan, Xu, Bian-li
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4862149/
https://www.ncbi.nlm.nih.gov/pubmed/27160572
http://dx.doi.org/10.1186/s12936-016-1306-6
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author Zhou, Rui-min
Zhang, Hong-wei
Yang, Cheng-yun
Liu, Ying
Zhao, Yu-ling
Li, Su-hua
Qian, Dan
Xu, Bian-li
author_facet Zhou, Rui-min
Zhang, Hong-wei
Yang, Cheng-yun
Liu, Ying
Zhao, Yu-ling
Li, Su-hua
Qian, Dan
Xu, Bian-li
author_sort Zhou, Rui-min
collection PubMed
description BACKGROUND: Anti-malarial drug resistance is a primary public health problem. Haplotypes of pfcrt gene have been implicated to be molecular markers of chloroquine (CQ) resistance. This study aims to explore the prevalence of polymorphisms in pfcrt in Plasmodium falciparum-infected patients imported from Africa in Henan province. METHODS: Blood samples were collected from 502 patients who were infected with P. falciparum returning from Africa in Henan province during 2012–2015. The single nucleotide polymorphisms in pfcrt (codons 72–76) were assessed by nested PCR with DNA sequencing and restriction digestion, the haplotype prevalences were also determined. RESULTS: Four haplotypes coding 72–76 of pfcrt were found including CVMNK (wild type), CVIET (mutation type), CVIEK (mutation type), and CV M/I N/E/D/K K/T (mixed type), with 61.95 % (311/502), 33.07 % (166/502), 0.20 % (1/502), and 4.78 % (24/502) prevalence, respectively. Except mixed type, CVIET and CVIEK were the largest proportion of the mutant type in West Africa, accounting for 44.83 % (91/203), followed by East Africa (8/21, 38.10 %), North Africa (4/11, 36.36 %), Central Africa (36/135, 26.67 %), and South Africa (28/132, 21.21 %). There was significant difference among the groups (χ(2) = 23.78, P < 0.05). Mixed type was the largest proportion in North Africa (9.09 %), followed by Central Africa (6.67 %), East Africa (4.76 %), South Africa (4.55 %), and West Africa (3.45 %). There was no significant difference among the groups (χ(2) = 2.31, P > 0.05). The position 72 and 73 of pfcrt showed predominance for the wild type with rates of 100 % (502/502). CONCLUSIONS: This study identified four haplotypes of pfcrt in P. falciparum-infected patients imported from Africa in Henan province. The prevalence of mutations in the pfcrt was dropped comparing with other people’s researches. It establishes fundamental data for detection of P. falciparum CQR with molecular markers for the imported P. falciparum in China, and it also provides complementary information of CQR for the malaria endemic countries and assesses the evolution of anti-malarial drug resistance.
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spelling pubmed-48621492016-05-11 Molecular mutation profile of pfcrt in Plasmodium falciparum isolates imported from Africa in Henan province Zhou, Rui-min Zhang, Hong-wei Yang, Cheng-yun Liu, Ying Zhao, Yu-ling Li, Su-hua Qian, Dan Xu, Bian-li Malar J Research BACKGROUND: Anti-malarial drug resistance is a primary public health problem. Haplotypes of pfcrt gene have been implicated to be molecular markers of chloroquine (CQ) resistance. This study aims to explore the prevalence of polymorphisms in pfcrt in Plasmodium falciparum-infected patients imported from Africa in Henan province. METHODS: Blood samples were collected from 502 patients who were infected with P. falciparum returning from Africa in Henan province during 2012–2015. The single nucleotide polymorphisms in pfcrt (codons 72–76) were assessed by nested PCR with DNA sequencing and restriction digestion, the haplotype prevalences were also determined. RESULTS: Four haplotypes coding 72–76 of pfcrt were found including CVMNK (wild type), CVIET (mutation type), CVIEK (mutation type), and CV M/I N/E/D/K K/T (mixed type), with 61.95 % (311/502), 33.07 % (166/502), 0.20 % (1/502), and 4.78 % (24/502) prevalence, respectively. Except mixed type, CVIET and CVIEK were the largest proportion of the mutant type in West Africa, accounting for 44.83 % (91/203), followed by East Africa (8/21, 38.10 %), North Africa (4/11, 36.36 %), Central Africa (36/135, 26.67 %), and South Africa (28/132, 21.21 %). There was significant difference among the groups (χ(2) = 23.78, P < 0.05). Mixed type was the largest proportion in North Africa (9.09 %), followed by Central Africa (6.67 %), East Africa (4.76 %), South Africa (4.55 %), and West Africa (3.45 %). There was no significant difference among the groups (χ(2) = 2.31, P > 0.05). The position 72 and 73 of pfcrt showed predominance for the wild type with rates of 100 % (502/502). CONCLUSIONS: This study identified four haplotypes of pfcrt in P. falciparum-infected patients imported from Africa in Henan province. The prevalence of mutations in the pfcrt was dropped comparing with other people’s researches. It establishes fundamental data for detection of P. falciparum CQR with molecular markers for the imported P. falciparum in China, and it also provides complementary information of CQR for the malaria endemic countries and assesses the evolution of anti-malarial drug resistance. BioMed Central 2016-05-10 /pmc/articles/PMC4862149/ /pubmed/27160572 http://dx.doi.org/10.1186/s12936-016-1306-6 Text en © Zhou et al. 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Zhou, Rui-min
Zhang, Hong-wei
Yang, Cheng-yun
Liu, Ying
Zhao, Yu-ling
Li, Su-hua
Qian, Dan
Xu, Bian-li
Molecular mutation profile of pfcrt in Plasmodium falciparum isolates imported from Africa in Henan province
title Molecular mutation profile of pfcrt in Plasmodium falciparum isolates imported from Africa in Henan province
title_full Molecular mutation profile of pfcrt in Plasmodium falciparum isolates imported from Africa in Henan province
title_fullStr Molecular mutation profile of pfcrt in Plasmodium falciparum isolates imported from Africa in Henan province
title_full_unstemmed Molecular mutation profile of pfcrt in Plasmodium falciparum isolates imported from Africa in Henan province
title_short Molecular mutation profile of pfcrt in Plasmodium falciparum isolates imported from Africa in Henan province
title_sort molecular mutation profile of pfcrt in plasmodium falciparum isolates imported from africa in henan province
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4862149/
https://www.ncbi.nlm.nih.gov/pubmed/27160572
http://dx.doi.org/10.1186/s12936-016-1306-6
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