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Spike Code Flow in Cultured Neuronal Networks
We observed spike trains produced by one-shot electrical stimulation with 8 × 8 multielectrodes in cultured neuronal networks. Each electrode accepted spikes from several neurons. We extracted the short codes from spike trains and obtained a code spectrum with a nominal time accuracy of 1%. We then...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi Publishing Corporation
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4863084/ https://www.ncbi.nlm.nih.gov/pubmed/27217825 http://dx.doi.org/10.1155/2016/7267691 |
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author | Tamura, Shinichi Nishitani, Yoshi Hosokawa, Chie Miyoshi, Tomomitsu Sawai, Hajime Kamimura, Takuya Yagi, Yasushi Mizuno-Matsumoto, Yuko Chen, Yen-Wei |
author_facet | Tamura, Shinichi Nishitani, Yoshi Hosokawa, Chie Miyoshi, Tomomitsu Sawai, Hajime Kamimura, Takuya Yagi, Yasushi Mizuno-Matsumoto, Yuko Chen, Yen-Wei |
author_sort | Tamura, Shinichi |
collection | PubMed |
description | We observed spike trains produced by one-shot electrical stimulation with 8 × 8 multielectrodes in cultured neuronal networks. Each electrode accepted spikes from several neurons. We extracted the short codes from spike trains and obtained a code spectrum with a nominal time accuracy of 1%. We then constructed code flow maps as movies of the electrode array to observe the code flow of “1101” and “1011,” which are typical pseudorandom sequence such as that we often encountered in a literature and our experiments. They seemed to flow from one electrode to the neighboring one and maintained their shape to some extent. To quantify the flow, we calculated the “maximum cross-correlations” among neighboring electrodes, to find the direction of maximum flow of the codes with lengths less than 8. Normalized maximum cross-correlations were almost constant irrespective of code. Furthermore, if the spike trains were shuffled in interval orders or in electrodes, they became significantly small. Thus, the analysis suggested that local codes of approximately constant shape propagated and conveyed information across the network. Hence, the codes can serve as visible and trackable marks of propagating spike waves as well as evaluating information flow in the neuronal network. |
format | Online Article Text |
id | pubmed-4863084 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Hindawi Publishing Corporation |
record_format | MEDLINE/PubMed |
spelling | pubmed-48630842016-05-23 Spike Code Flow in Cultured Neuronal Networks Tamura, Shinichi Nishitani, Yoshi Hosokawa, Chie Miyoshi, Tomomitsu Sawai, Hajime Kamimura, Takuya Yagi, Yasushi Mizuno-Matsumoto, Yuko Chen, Yen-Wei Comput Intell Neurosci Research Article We observed spike trains produced by one-shot electrical stimulation with 8 × 8 multielectrodes in cultured neuronal networks. Each electrode accepted spikes from several neurons. We extracted the short codes from spike trains and obtained a code spectrum with a nominal time accuracy of 1%. We then constructed code flow maps as movies of the electrode array to observe the code flow of “1101” and “1011,” which are typical pseudorandom sequence such as that we often encountered in a literature and our experiments. They seemed to flow from one electrode to the neighboring one and maintained their shape to some extent. To quantify the flow, we calculated the “maximum cross-correlations” among neighboring electrodes, to find the direction of maximum flow of the codes with lengths less than 8. Normalized maximum cross-correlations were almost constant irrespective of code. Furthermore, if the spike trains were shuffled in interval orders or in electrodes, they became significantly small. Thus, the analysis suggested that local codes of approximately constant shape propagated and conveyed information across the network. Hence, the codes can serve as visible and trackable marks of propagating spike waves as well as evaluating information flow in the neuronal network. Hindawi Publishing Corporation 2016 2016-04-27 /pmc/articles/PMC4863084/ /pubmed/27217825 http://dx.doi.org/10.1155/2016/7267691 Text en Copyright © 2016 Shinichi Tamura et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Tamura, Shinichi Nishitani, Yoshi Hosokawa, Chie Miyoshi, Tomomitsu Sawai, Hajime Kamimura, Takuya Yagi, Yasushi Mizuno-Matsumoto, Yuko Chen, Yen-Wei Spike Code Flow in Cultured Neuronal Networks |
title | Spike Code Flow in Cultured Neuronal Networks |
title_full | Spike Code Flow in Cultured Neuronal Networks |
title_fullStr | Spike Code Flow in Cultured Neuronal Networks |
title_full_unstemmed | Spike Code Flow in Cultured Neuronal Networks |
title_short | Spike Code Flow in Cultured Neuronal Networks |
title_sort | spike code flow in cultured neuronal networks |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4863084/ https://www.ncbi.nlm.nih.gov/pubmed/27217825 http://dx.doi.org/10.1155/2016/7267691 |
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