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Spike Code Flow in Cultured Neuronal Networks

We observed spike trains produced by one-shot electrical stimulation with 8 × 8 multielectrodes in cultured neuronal networks. Each electrode accepted spikes from several neurons. We extracted the short codes from spike trains and obtained a code spectrum with a nominal time accuracy of 1%. We then...

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Autores principales: Tamura, Shinichi, Nishitani, Yoshi, Hosokawa, Chie, Miyoshi, Tomomitsu, Sawai, Hajime, Kamimura, Takuya, Yagi, Yasushi, Mizuno-Matsumoto, Yuko, Chen, Yen-Wei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4863084/
https://www.ncbi.nlm.nih.gov/pubmed/27217825
http://dx.doi.org/10.1155/2016/7267691
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author Tamura, Shinichi
Nishitani, Yoshi
Hosokawa, Chie
Miyoshi, Tomomitsu
Sawai, Hajime
Kamimura, Takuya
Yagi, Yasushi
Mizuno-Matsumoto, Yuko
Chen, Yen-Wei
author_facet Tamura, Shinichi
Nishitani, Yoshi
Hosokawa, Chie
Miyoshi, Tomomitsu
Sawai, Hajime
Kamimura, Takuya
Yagi, Yasushi
Mizuno-Matsumoto, Yuko
Chen, Yen-Wei
author_sort Tamura, Shinichi
collection PubMed
description We observed spike trains produced by one-shot electrical stimulation with 8 × 8 multielectrodes in cultured neuronal networks. Each electrode accepted spikes from several neurons. We extracted the short codes from spike trains and obtained a code spectrum with a nominal time accuracy of 1%. We then constructed code flow maps as movies of the electrode array to observe the code flow of “1101” and “1011,” which are typical pseudorandom sequence such as that we often encountered in a literature and our experiments. They seemed to flow from one electrode to the neighboring one and maintained their shape to some extent. To quantify the flow, we calculated the “maximum cross-correlations” among neighboring electrodes, to find the direction of maximum flow of the codes with lengths less than 8. Normalized maximum cross-correlations were almost constant irrespective of code. Furthermore, if the spike trains were shuffled in interval orders or in electrodes, they became significantly small. Thus, the analysis suggested that local codes of approximately constant shape propagated and conveyed information across the network. Hence, the codes can serve as visible and trackable marks of propagating spike waves as well as evaluating information flow in the neuronal network.
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spelling pubmed-48630842016-05-23 Spike Code Flow in Cultured Neuronal Networks Tamura, Shinichi Nishitani, Yoshi Hosokawa, Chie Miyoshi, Tomomitsu Sawai, Hajime Kamimura, Takuya Yagi, Yasushi Mizuno-Matsumoto, Yuko Chen, Yen-Wei Comput Intell Neurosci Research Article We observed spike trains produced by one-shot electrical stimulation with 8 × 8 multielectrodes in cultured neuronal networks. Each electrode accepted spikes from several neurons. We extracted the short codes from spike trains and obtained a code spectrum with a nominal time accuracy of 1%. We then constructed code flow maps as movies of the electrode array to observe the code flow of “1101” and “1011,” which are typical pseudorandom sequence such as that we often encountered in a literature and our experiments. They seemed to flow from one electrode to the neighboring one and maintained their shape to some extent. To quantify the flow, we calculated the “maximum cross-correlations” among neighboring electrodes, to find the direction of maximum flow of the codes with lengths less than 8. Normalized maximum cross-correlations were almost constant irrespective of code. Furthermore, if the spike trains were shuffled in interval orders or in electrodes, they became significantly small. Thus, the analysis suggested that local codes of approximately constant shape propagated and conveyed information across the network. Hence, the codes can serve as visible and trackable marks of propagating spike waves as well as evaluating information flow in the neuronal network. Hindawi Publishing Corporation 2016 2016-04-27 /pmc/articles/PMC4863084/ /pubmed/27217825 http://dx.doi.org/10.1155/2016/7267691 Text en Copyright © 2016 Shinichi Tamura et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Tamura, Shinichi
Nishitani, Yoshi
Hosokawa, Chie
Miyoshi, Tomomitsu
Sawai, Hajime
Kamimura, Takuya
Yagi, Yasushi
Mizuno-Matsumoto, Yuko
Chen, Yen-Wei
Spike Code Flow in Cultured Neuronal Networks
title Spike Code Flow in Cultured Neuronal Networks
title_full Spike Code Flow in Cultured Neuronal Networks
title_fullStr Spike Code Flow in Cultured Neuronal Networks
title_full_unstemmed Spike Code Flow in Cultured Neuronal Networks
title_short Spike Code Flow in Cultured Neuronal Networks
title_sort spike code flow in cultured neuronal networks
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4863084/
https://www.ncbi.nlm.nih.gov/pubmed/27217825
http://dx.doi.org/10.1155/2016/7267691
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