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Validation of a rapid one-step high sensitivity real-time quantitative PCR system for detecting major BCR-ABL1 mRNA on an International Scale

BACKGROUND: Detection and quantitation of BCR-ABL1 transcripts are crucial for managing patients with chronic myeloid leukemia (CML). Although real-time quantitative polymerase chain reaction (RT-qPCR) can be measured on an International Scale (IS), this has not become fully universal. By using a WH...

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Autores principales: Yoshida, Chikashi, Nakamae, Hirohisa, Fletcher, Linda, Koga, Daisuke, Sogabe, Takayuki, Matsumura, Itaru, Kanakura, Yuzuru, Branford, Susan, Naoe, Tomoki
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4864793/
https://www.ncbi.nlm.nih.gov/pubmed/27247866
http://dx.doi.org/10.1186/s40064-016-2258-6
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author Yoshida, Chikashi
Nakamae, Hirohisa
Fletcher, Linda
Koga, Daisuke
Sogabe, Takayuki
Matsumura, Itaru
Kanakura, Yuzuru
Branford, Susan
Naoe, Tomoki
author_facet Yoshida, Chikashi
Nakamae, Hirohisa
Fletcher, Linda
Koga, Daisuke
Sogabe, Takayuki
Matsumura, Itaru
Kanakura, Yuzuru
Branford, Susan
Naoe, Tomoki
author_sort Yoshida, Chikashi
collection PubMed
description BACKGROUND: Detection and quantitation of BCR-ABL1 transcripts are crucial for managing patients with chronic myeloid leukemia (CML). Although real-time quantitative polymerase chain reaction (RT-qPCR) can be measured on an International Scale (IS), this has not become fully universal. By using a WHO international standard panel established for calibrating secondary standards based on the IS, we have previously developed an RT-qPCR kit, ODK-1201, for quantification of major BCR-ABL1. RESULTS: In this study, the reliability of kit-specific conversion factor 1.12 was validated by exchanging patients’ samples between three local clinical laboratories and a reference laboratory. The mean bias of the local method after IS conversion was 1.6 fold lower than the reference method. The clinically-useful sensitivity of the kit was further evaluated for monitoring patients with deep molecular response. Based on the correlation of the IS values between ODK-1201 and the reference laboratory method, the detection level of the kit was estimated as 0.0032 % BCR-ABL1(IS). CONCLUSIONS: ODK-1201 is a highly sensitive one-step RT-qPCR system for detecting BCR-ABL1 on the IS in 2 h after RNA extraction, thus contributing to standardization of molecular monitoring in CML.
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spelling pubmed-48647932016-05-31 Validation of a rapid one-step high sensitivity real-time quantitative PCR system for detecting major BCR-ABL1 mRNA on an International Scale Yoshida, Chikashi Nakamae, Hirohisa Fletcher, Linda Koga, Daisuke Sogabe, Takayuki Matsumura, Itaru Kanakura, Yuzuru Branford, Susan Naoe, Tomoki Springerplus Research BACKGROUND: Detection and quantitation of BCR-ABL1 transcripts are crucial for managing patients with chronic myeloid leukemia (CML). Although real-time quantitative polymerase chain reaction (RT-qPCR) can be measured on an International Scale (IS), this has not become fully universal. By using a WHO international standard panel established for calibrating secondary standards based on the IS, we have previously developed an RT-qPCR kit, ODK-1201, for quantification of major BCR-ABL1. RESULTS: In this study, the reliability of kit-specific conversion factor 1.12 was validated by exchanging patients’ samples between three local clinical laboratories and a reference laboratory. The mean bias of the local method after IS conversion was 1.6 fold lower than the reference method. The clinically-useful sensitivity of the kit was further evaluated for monitoring patients with deep molecular response. Based on the correlation of the IS values between ODK-1201 and the reference laboratory method, the detection level of the kit was estimated as 0.0032 % BCR-ABL1(IS). CONCLUSIONS: ODK-1201 is a highly sensitive one-step RT-qPCR system for detecting BCR-ABL1 on the IS in 2 h after RNA extraction, thus contributing to standardization of molecular monitoring in CML. Springer International Publishing 2016-05-10 /pmc/articles/PMC4864793/ /pubmed/27247866 http://dx.doi.org/10.1186/s40064-016-2258-6 Text en © The Author(s). 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Research
Yoshida, Chikashi
Nakamae, Hirohisa
Fletcher, Linda
Koga, Daisuke
Sogabe, Takayuki
Matsumura, Itaru
Kanakura, Yuzuru
Branford, Susan
Naoe, Tomoki
Validation of a rapid one-step high sensitivity real-time quantitative PCR system for detecting major BCR-ABL1 mRNA on an International Scale
title Validation of a rapid one-step high sensitivity real-time quantitative PCR system for detecting major BCR-ABL1 mRNA on an International Scale
title_full Validation of a rapid one-step high sensitivity real-time quantitative PCR system for detecting major BCR-ABL1 mRNA on an International Scale
title_fullStr Validation of a rapid one-step high sensitivity real-time quantitative PCR system for detecting major BCR-ABL1 mRNA on an International Scale
title_full_unstemmed Validation of a rapid one-step high sensitivity real-time quantitative PCR system for detecting major BCR-ABL1 mRNA on an International Scale
title_short Validation of a rapid one-step high sensitivity real-time quantitative PCR system for detecting major BCR-ABL1 mRNA on an International Scale
title_sort validation of a rapid one-step high sensitivity real-time quantitative pcr system for detecting major bcr-abl1 mrna on an international scale
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4864793/
https://www.ncbi.nlm.nih.gov/pubmed/27247866
http://dx.doi.org/10.1186/s40064-016-2258-6
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