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One library to make them all: Streamlining yeast library creation by a SWAp-Tag (SWAT) strategy

The yeast Saccharomyces cerevisiae is ideal for systematic studies relying on collections of modified strains (libraries). Despite the significance of yeast libraries and the immense variety of available tags and regulatory elements, only a few such libraries exist as their construction is extremely...

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Autores principales: Yofe, Ido, Weill, Uri, Meurer, Matthias, Chuartzman, Silvia, Zalckvar, Einat, Goldman, Omer, Ben-Dor, Shifra, Schütze, Conny, Wiedemann, Nils, Knop, Michael, Khmelinskii, Anton, Schuldiner, Maya
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4869835/
https://www.ncbi.nlm.nih.gov/pubmed/26928762
http://dx.doi.org/10.1038/nmeth.3795
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author Yofe, Ido
Weill, Uri
Meurer, Matthias
Chuartzman, Silvia
Zalckvar, Einat
Goldman, Omer
Ben-Dor, Shifra
Schütze, Conny
Wiedemann, Nils
Knop, Michael
Khmelinskii, Anton
Schuldiner, Maya
author_facet Yofe, Ido
Weill, Uri
Meurer, Matthias
Chuartzman, Silvia
Zalckvar, Einat
Goldman, Omer
Ben-Dor, Shifra
Schütze, Conny
Wiedemann, Nils
Knop, Michael
Khmelinskii, Anton
Schuldiner, Maya
author_sort Yofe, Ido
collection PubMed
description The yeast Saccharomyces cerevisiae is ideal for systematic studies relying on collections of modified strains (libraries). Despite the significance of yeast libraries and the immense variety of available tags and regulatory elements, only a few such libraries exist as their construction is extremely expensive and laborious. To overcome these limitations we developed a SWAp-Tag method (SWAT), in which one parental library can be modified easily and efficiently to give rise to an endless variety of libraries of choice. We showcase the versatility of the SWAT approach by constructing and investigating a library of ~1,800 strains carrying a SWAT-GFP module at the amino termini of endomembrane proteins and then using it to create two new libraries (mCherry or seamless GFP). Our work demonstrates how the SWAT method enables fast and effortless creation of yeast libraries, opening the door for endless new ways to systematically study cell biology.
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spelling pubmed-48698352016-09-22 One library to make them all: Streamlining yeast library creation by a SWAp-Tag (SWAT) strategy Yofe, Ido Weill, Uri Meurer, Matthias Chuartzman, Silvia Zalckvar, Einat Goldman, Omer Ben-Dor, Shifra Schütze, Conny Wiedemann, Nils Knop, Michael Khmelinskii, Anton Schuldiner, Maya Nat Methods Article The yeast Saccharomyces cerevisiae is ideal for systematic studies relying on collections of modified strains (libraries). Despite the significance of yeast libraries and the immense variety of available tags and regulatory elements, only a few such libraries exist as their construction is extremely expensive and laborious. To overcome these limitations we developed a SWAp-Tag method (SWAT), in which one parental library can be modified easily and efficiently to give rise to an endless variety of libraries of choice. We showcase the versatility of the SWAT approach by constructing and investigating a library of ~1,800 strains carrying a SWAT-GFP module at the amino termini of endomembrane proteins and then using it to create two new libraries (mCherry or seamless GFP). Our work demonstrates how the SWAT method enables fast and effortless creation of yeast libraries, opening the door for endless new ways to systematically study cell biology. 2016-02-29 2016-04 /pmc/articles/PMC4869835/ /pubmed/26928762 http://dx.doi.org/10.1038/nmeth.3795 Text en Users may view, print, copy, and download text and data-mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use:http://www.nature.com/authors/editorial_policies/license.html#terms
spellingShingle Article
Yofe, Ido
Weill, Uri
Meurer, Matthias
Chuartzman, Silvia
Zalckvar, Einat
Goldman, Omer
Ben-Dor, Shifra
Schütze, Conny
Wiedemann, Nils
Knop, Michael
Khmelinskii, Anton
Schuldiner, Maya
One library to make them all: Streamlining yeast library creation by a SWAp-Tag (SWAT) strategy
title One library to make them all: Streamlining yeast library creation by a SWAp-Tag (SWAT) strategy
title_full One library to make them all: Streamlining yeast library creation by a SWAp-Tag (SWAT) strategy
title_fullStr One library to make them all: Streamlining yeast library creation by a SWAp-Tag (SWAT) strategy
title_full_unstemmed One library to make them all: Streamlining yeast library creation by a SWAp-Tag (SWAT) strategy
title_short One library to make them all: Streamlining yeast library creation by a SWAp-Tag (SWAT) strategy
title_sort one library to make them all: streamlining yeast library creation by a swap-tag (swat) strategy
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4869835/
https://www.ncbi.nlm.nih.gov/pubmed/26928762
http://dx.doi.org/10.1038/nmeth.3795
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