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Prospective acceleration of diffusion tensor imaging with compressed sensing using adaptive dictionaries

PURPOSE: Diffusion MRI requires acquisition of multiple diffusion‐weighted images, resulting in long scan times. Here, we investigate combining compressed sensing and a fast imaging sequence to dramatically reduce acquisition times in cardiac diffusion MRI. METHODS: Fully sampled and prospectively u...

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Autores principales: McClymont, Darryl, Teh, Irvin, Whittington, Hannah J., Grau, Vicente, Schneider, Jürgen E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4869836/
https://www.ncbi.nlm.nih.gov/pubmed/26302363
http://dx.doi.org/10.1002/mrm.25876
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author McClymont, Darryl
Teh, Irvin
Whittington, Hannah J.
Grau, Vicente
Schneider, Jürgen E.
author_facet McClymont, Darryl
Teh, Irvin
Whittington, Hannah J.
Grau, Vicente
Schneider, Jürgen E.
author_sort McClymont, Darryl
collection PubMed
description PURPOSE: Diffusion MRI requires acquisition of multiple diffusion‐weighted images, resulting in long scan times. Here, we investigate combining compressed sensing and a fast imaging sequence to dramatically reduce acquisition times in cardiac diffusion MRI. METHODS: Fully sampled and prospectively undersampled diffusion tensor imaging data were acquired in five rat hearts at acceleration factors of between two and six using a fast spin echo (FSE) sequence. Images were reconstructed using a compressed sensing framework, enforcing sparsity by means of decomposition by adaptive dictionaries. A tensor was fit to the reconstructed images and fiber tractography was performed. RESULTS: Acceleration factors of up to six were achieved, with a modest increase in root mean square error of mean apparent diffusion coefficient (ADC), fractional anisotropy (FA), and helix angle. At an acceleration factor of six, mean values of ADC and FA were within 2.5% and 5% of the ground truth, respectively. Marginal differences were observed in the fiber tracts. CONCLUSION: We developed a new k‐space sampling strategy for acquiring prospectively undersampled diffusion‐weighted data, and validated a novel compressed sensing reconstruction algorithm based on adaptive dictionaries. The k‐space undersampling and FSE acquisition each reduced acquisition times by up to 6× and 8×, respectively, as compared to fully sampled spin echo imaging. Magn Reson Med 76:248–258, 2016. © 2015 Wiley Periodicals, Inc.
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spelling pubmed-48698362016-06-22 Prospective acceleration of diffusion tensor imaging with compressed sensing using adaptive dictionaries McClymont, Darryl Teh, Irvin Whittington, Hannah J. Grau, Vicente Schneider, Jürgen E. Magn Reson Med Preclinical and Clinical Imaging – Full Papers PURPOSE: Diffusion MRI requires acquisition of multiple diffusion‐weighted images, resulting in long scan times. Here, we investigate combining compressed sensing and a fast imaging sequence to dramatically reduce acquisition times in cardiac diffusion MRI. METHODS: Fully sampled and prospectively undersampled diffusion tensor imaging data were acquired in five rat hearts at acceleration factors of between two and six using a fast spin echo (FSE) sequence. Images were reconstructed using a compressed sensing framework, enforcing sparsity by means of decomposition by adaptive dictionaries. A tensor was fit to the reconstructed images and fiber tractography was performed. RESULTS: Acceleration factors of up to six were achieved, with a modest increase in root mean square error of mean apparent diffusion coefficient (ADC), fractional anisotropy (FA), and helix angle. At an acceleration factor of six, mean values of ADC and FA were within 2.5% and 5% of the ground truth, respectively. Marginal differences were observed in the fiber tracts. CONCLUSION: We developed a new k‐space sampling strategy for acquiring prospectively undersampled diffusion‐weighted data, and validated a novel compressed sensing reconstruction algorithm based on adaptive dictionaries. The k‐space undersampling and FSE acquisition each reduced acquisition times by up to 6× and 8×, respectively, as compared to fully sampled spin echo imaging. Magn Reson Med 76:248–258, 2016. © 2015 Wiley Periodicals, Inc. John Wiley and Sons Inc. 2015-08-24 2016-07 /pmc/articles/PMC4869836/ /pubmed/26302363 http://dx.doi.org/10.1002/mrm.25876 Text en © 2015 The Authors. Magnetic Resonance in Medicine published by Wiley Periodicals, Inc. on behalf of International Society for Magnetic Resonance in Medicine. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Preclinical and Clinical Imaging – Full Papers
McClymont, Darryl
Teh, Irvin
Whittington, Hannah J.
Grau, Vicente
Schneider, Jürgen E.
Prospective acceleration of diffusion tensor imaging with compressed sensing using adaptive dictionaries
title Prospective acceleration of diffusion tensor imaging with compressed sensing using adaptive dictionaries
title_full Prospective acceleration of diffusion tensor imaging with compressed sensing using adaptive dictionaries
title_fullStr Prospective acceleration of diffusion tensor imaging with compressed sensing using adaptive dictionaries
title_full_unstemmed Prospective acceleration of diffusion tensor imaging with compressed sensing using adaptive dictionaries
title_short Prospective acceleration of diffusion tensor imaging with compressed sensing using adaptive dictionaries
title_sort prospective acceleration of diffusion tensor imaging with compressed sensing using adaptive dictionaries
topic Preclinical and Clinical Imaging – Full Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4869836/
https://www.ncbi.nlm.nih.gov/pubmed/26302363
http://dx.doi.org/10.1002/mrm.25876
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