Cargando…
Creation of an Accurate Algorithm to Detect Snellen Best Documented Visual Acuity from Ophthalmology Electronic Health Record Notes
BACKGROUND: Visual acuity is the primary measure used in ophthalmology to determine how well a patient can see. Visual acuity for a single eye may be recorded in multiple ways for a single patient visit (eg, Snellen vs. Jäger units vs. font print size), and be recorded for either distance or near vi...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Gunther Eysenbach
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4871992/ https://www.ncbi.nlm.nih.gov/pubmed/27146002 http://dx.doi.org/10.2196/medinform.4732 |
_version_ | 1782432665262096384 |
---|---|
author | Mbagwu, Michael French, Dustin D Gill, Manjot Mitchell, Christopher Jackson, Kathryn Kho, Abel Bryar, Paul J |
author_facet | Mbagwu, Michael French, Dustin D Gill, Manjot Mitchell, Christopher Jackson, Kathryn Kho, Abel Bryar, Paul J |
author_sort | Mbagwu, Michael |
collection | PubMed |
description | BACKGROUND: Visual acuity is the primary measure used in ophthalmology to determine how well a patient can see. Visual acuity for a single eye may be recorded in multiple ways for a single patient visit (eg, Snellen vs. Jäger units vs. font print size), and be recorded for either distance or near vision. Capturing the best documented visual acuity (BDVA) of each eye in an individual patient visit is an important step for making electronic ophthalmology clinical notes useful in research. OBJECTIVE: Currently, there is limited methodology for capturing BDVA in an efficient and accurate manner from electronic health record (EHR) notes. We developed an algorithm to detect BDVA for right and left eyes from defined fields within electronic ophthalmology clinical notes. METHODS: We designed an algorithm to detect the BDVA from defined fields within 295,218 ophthalmology clinical notes with visual acuity data present. About 5668 unique responses were identified and an algorithm was developed to map all of the unique responses to a structured list of Snellen visual acuities. RESULTS: Visual acuity was captured from a total of 295,218 ophthalmology clinical notes during the study dates. The algorithm identified all visual acuities in the defined visual acuity section for each eye and returned a single BDVA for each eye. A clinician chart review of 100 random patient notes showed a 99% accuracy detecting BDVA from these records and 1% observed error. CONCLUSIONS: Our algorithm successfully captures best documented Snellen distance visual acuity from ophthalmology clinical notes and transforms a variety of inputs into a structured Snellen equivalent list. Our work, to the best of our knowledge, represents the first attempt at capturing visual acuity accurately from large numbers of electronic ophthalmology notes. Use of this algorithm can benefit research groups interested in assessing visual acuity for patient centered outcome. All codes used for this study are currently available, and will be made available online at https://phekb.org. |
format | Online Article Text |
id | pubmed-4871992 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Gunther Eysenbach |
record_format | MEDLINE/PubMed |
spelling | pubmed-48719922016-06-03 Creation of an Accurate Algorithm to Detect Snellen Best Documented Visual Acuity from Ophthalmology Electronic Health Record Notes Mbagwu, Michael French, Dustin D Gill, Manjot Mitchell, Christopher Jackson, Kathryn Kho, Abel Bryar, Paul J JMIR Med Inform Original Paper BACKGROUND: Visual acuity is the primary measure used in ophthalmology to determine how well a patient can see. Visual acuity for a single eye may be recorded in multiple ways for a single patient visit (eg, Snellen vs. Jäger units vs. font print size), and be recorded for either distance or near vision. Capturing the best documented visual acuity (BDVA) of each eye in an individual patient visit is an important step for making electronic ophthalmology clinical notes useful in research. OBJECTIVE: Currently, there is limited methodology for capturing BDVA in an efficient and accurate manner from electronic health record (EHR) notes. We developed an algorithm to detect BDVA for right and left eyes from defined fields within electronic ophthalmology clinical notes. METHODS: We designed an algorithm to detect the BDVA from defined fields within 295,218 ophthalmology clinical notes with visual acuity data present. About 5668 unique responses were identified and an algorithm was developed to map all of the unique responses to a structured list of Snellen visual acuities. RESULTS: Visual acuity was captured from a total of 295,218 ophthalmology clinical notes during the study dates. The algorithm identified all visual acuities in the defined visual acuity section for each eye and returned a single BDVA for each eye. A clinician chart review of 100 random patient notes showed a 99% accuracy detecting BDVA from these records and 1% observed error. CONCLUSIONS: Our algorithm successfully captures best documented Snellen distance visual acuity from ophthalmology clinical notes and transforms a variety of inputs into a structured Snellen equivalent list. Our work, to the best of our knowledge, represents the first attempt at capturing visual acuity accurately from large numbers of electronic ophthalmology notes. Use of this algorithm can benefit research groups interested in assessing visual acuity for patient centered outcome. All codes used for this study are currently available, and will be made available online at https://phekb.org. Gunther Eysenbach 2016-05-04 /pmc/articles/PMC4871992/ /pubmed/27146002 http://dx.doi.org/10.2196/medinform.4732 Text en ©Michael Mbagwu, Dustin D French, Manjot Gill, Christopher Mitchell, Kathryn Jackson, Abel Kho, Paul J Bryar. Originally published in JMIR Medical Informatics (http://medinform.jmir.org), 04.05.2016. https://creativecommons.org/licenses/by/2.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0/ (https://creativecommons.org/licenses/by/2.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in JMIR Medical Informatics, is properly cited. The complete bibliographic information, a link to the original publication on http://medinform.jmir.org/, as well as this copyright and license information must be included. |
spellingShingle | Original Paper Mbagwu, Michael French, Dustin D Gill, Manjot Mitchell, Christopher Jackson, Kathryn Kho, Abel Bryar, Paul J Creation of an Accurate Algorithm to Detect Snellen Best Documented Visual Acuity from Ophthalmology Electronic Health Record Notes |
title | Creation of an Accurate Algorithm to Detect Snellen Best Documented Visual Acuity from Ophthalmology Electronic Health Record Notes |
title_full | Creation of an Accurate Algorithm to Detect Snellen Best Documented Visual Acuity from Ophthalmology Electronic Health Record Notes |
title_fullStr | Creation of an Accurate Algorithm to Detect Snellen Best Documented Visual Acuity from Ophthalmology Electronic Health Record Notes |
title_full_unstemmed | Creation of an Accurate Algorithm to Detect Snellen Best Documented Visual Acuity from Ophthalmology Electronic Health Record Notes |
title_short | Creation of an Accurate Algorithm to Detect Snellen Best Documented Visual Acuity from Ophthalmology Electronic Health Record Notes |
title_sort | creation of an accurate algorithm to detect snellen best documented visual acuity from ophthalmology electronic health record notes |
topic | Original Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4871992/ https://www.ncbi.nlm.nih.gov/pubmed/27146002 http://dx.doi.org/10.2196/medinform.4732 |
work_keys_str_mv | AT mbagwumichael creationofanaccuratealgorithmtodetectsnellenbestdocumentedvisualacuityfromophthalmologyelectronichealthrecordnotes AT frenchdustind creationofanaccuratealgorithmtodetectsnellenbestdocumentedvisualacuityfromophthalmologyelectronichealthrecordnotes AT gillmanjot creationofanaccuratealgorithmtodetectsnellenbestdocumentedvisualacuityfromophthalmologyelectronichealthrecordnotes AT mitchellchristopher creationofanaccuratealgorithmtodetectsnellenbestdocumentedvisualacuityfromophthalmologyelectronichealthrecordnotes AT jacksonkathryn creationofanaccuratealgorithmtodetectsnellenbestdocumentedvisualacuityfromophthalmologyelectronichealthrecordnotes AT khoabel creationofanaccuratealgorithmtodetectsnellenbestdocumentedvisualacuityfromophthalmologyelectronichealthrecordnotes AT bryarpaulj creationofanaccuratealgorithmtodetectsnellenbestdocumentedvisualacuityfromophthalmologyelectronichealthrecordnotes |