Trajectories of microsecond molecular dynamics simulations of nucleosomes and nucleosome core particles

We present here raw trajectories of molecular dynamics simulations for nucleosome with linker DNA strands as well as minimalistic nucleosome core particle model. The simulations were done in explicit solvent using CHARMM36 force field. We used this data in the research article Shaytan et al., 2016 [...

Descripción completa

Detalles Bibliográficos
Autores principales: Shaytan, Alexey K., Armeev, Grigoriy A., Goncearenco, Alexander, Zhurkin, Victor B., Landsman, David, Panchenko, Anna R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2016
Materias:
Data Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4872717/
https://www.ncbi.nlm.nih.gov/pubmed/27222871
http://dx.doi.org/10.1016/j.dib.2016.04.073
Descripción
Sumario:We present here raw trajectories of molecular dynamics simulations for nucleosome with linker DNA strands as well as minimalistic nucleosome core particle model. The simulations were done in explicit solvent using CHARMM36 force field. We used this data in the research article Shaytan et al., 2016 [1]. The trajectory files are supplemented by TCL scripts providing advanced visualization capabilities.

Ejemplares similares