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Variable Nitrogen Fixation in Wild Populus

The microbiome of plants is diverse, and like that of animals, is important for overall health and nutrient acquisition. In legumes and actinorhizal plants, a portion of essential nitrogen (N) is obtained through symbiosis with nodule-inhabiting, N(2)-fixing microorganisms. However, a variety of non...

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Autores principales: Doty, Sharon L., Sher, Andrew W., Fleck, Neil D., Khorasani, Mahsa, Bumgarner, Roger E., Khan, Zareen, Ko, Andrew W. K., Kim, Soo-Hyung, DeLuca, Thomas H.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4873266/
https://www.ncbi.nlm.nih.gov/pubmed/27196608
http://dx.doi.org/10.1371/journal.pone.0155979
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author Doty, Sharon L.
Sher, Andrew W.
Fleck, Neil D.
Khorasani, Mahsa
Bumgarner, Roger E.
Khan, Zareen
Ko, Andrew W. K.
Kim, Soo-Hyung
DeLuca, Thomas H.
author_facet Doty, Sharon L.
Sher, Andrew W.
Fleck, Neil D.
Khorasani, Mahsa
Bumgarner, Roger E.
Khan, Zareen
Ko, Andrew W. K.
Kim, Soo-Hyung
DeLuca, Thomas H.
author_sort Doty, Sharon L.
collection PubMed
description The microbiome of plants is diverse, and like that of animals, is important for overall health and nutrient acquisition. In legumes and actinorhizal plants, a portion of essential nitrogen (N) is obtained through symbiosis with nodule-inhabiting, N(2)-fixing microorganisms. However, a variety of non-nodulating plant species can also thrive in natural, low-N settings. Some of these species may rely on endophytes, microorganisms that live within plants, to fix N(2) gas into usable forms. Here we report the first direct evidence of N(2) fixation in the early successional wild tree, Populus trichocarpa, a non-leguminous tree, from its native riparian habitat. In order to measure N(2) fixation, surface-sterilized cuttings of wild poplar were assayed using both (15)N(2) incorporation and the commonly used acetylene reduction assay. The (15)N label was incorporated at high levels in a subset of cuttings, suggesting a high level of N-fixation. Similarly, acetylene was reduced to ethylene in some samples. The microbiota of the cuttings was highly variable, both in numbers of cultured bacteria and in genetic diversity. Our results indicated that associative N(2)-fixation occurred within wild poplar and that a non-uniformity in the distribution of endophytic bacteria may explain the variability in N-fixation activity. These results point to the need for molecular studies to decipher the required microbial consortia and conditions for effective endophytic N(2)-fixation in trees.
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spelling pubmed-48732662016-06-09 Variable Nitrogen Fixation in Wild Populus Doty, Sharon L. Sher, Andrew W. Fleck, Neil D. Khorasani, Mahsa Bumgarner, Roger E. Khan, Zareen Ko, Andrew W. K. Kim, Soo-Hyung DeLuca, Thomas H. PLoS One Research Article The microbiome of plants is diverse, and like that of animals, is important for overall health and nutrient acquisition. In legumes and actinorhizal plants, a portion of essential nitrogen (N) is obtained through symbiosis with nodule-inhabiting, N(2)-fixing microorganisms. However, a variety of non-nodulating plant species can also thrive in natural, low-N settings. Some of these species may rely on endophytes, microorganisms that live within plants, to fix N(2) gas into usable forms. Here we report the first direct evidence of N(2) fixation in the early successional wild tree, Populus trichocarpa, a non-leguminous tree, from its native riparian habitat. In order to measure N(2) fixation, surface-sterilized cuttings of wild poplar were assayed using both (15)N(2) incorporation and the commonly used acetylene reduction assay. The (15)N label was incorporated at high levels in a subset of cuttings, suggesting a high level of N-fixation. Similarly, acetylene was reduced to ethylene in some samples. The microbiota of the cuttings was highly variable, both in numbers of cultured bacteria and in genetic diversity. Our results indicated that associative N(2)-fixation occurred within wild poplar and that a non-uniformity in the distribution of endophytic bacteria may explain the variability in N-fixation activity. These results point to the need for molecular studies to decipher the required microbial consortia and conditions for effective endophytic N(2)-fixation in trees. Public Library of Science 2016-05-19 /pmc/articles/PMC4873266/ /pubmed/27196608 http://dx.doi.org/10.1371/journal.pone.0155979 Text en © 2016 Doty et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Doty, Sharon L.
Sher, Andrew W.
Fleck, Neil D.
Khorasani, Mahsa
Bumgarner, Roger E.
Khan, Zareen
Ko, Andrew W. K.
Kim, Soo-Hyung
DeLuca, Thomas H.
Variable Nitrogen Fixation in Wild Populus
title Variable Nitrogen Fixation in Wild Populus
title_full Variable Nitrogen Fixation in Wild Populus
title_fullStr Variable Nitrogen Fixation in Wild Populus
title_full_unstemmed Variable Nitrogen Fixation in Wild Populus
title_short Variable Nitrogen Fixation in Wild Populus
title_sort variable nitrogen fixation in wild populus
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4873266/
https://www.ncbi.nlm.nih.gov/pubmed/27196608
http://dx.doi.org/10.1371/journal.pone.0155979
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