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Link-Prediction Enhanced Consensus Clustering for Complex Networks
Many real networks that are collected or inferred from data are incomplete due to missing edges. Missing edges can be inherent to the dataset (Facebook friend links will never be complete) or the result of sampling (one may only have access to a portion of the data). The consequence is that downstre...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4874693/ https://www.ncbi.nlm.nih.gov/pubmed/27203750 http://dx.doi.org/10.1371/journal.pone.0153384 |
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author | Burgess, Matthew Adar, Eytan Cafarella, Michael |
author_facet | Burgess, Matthew Adar, Eytan Cafarella, Michael |
author_sort | Burgess, Matthew |
collection | PubMed |
description | Many real networks that are collected or inferred from data are incomplete due to missing edges. Missing edges can be inherent to the dataset (Facebook friend links will never be complete) or the result of sampling (one may only have access to a portion of the data). The consequence is that downstream analyses that “consume” the network will often yield less accurate results than if the edges were complete. Community detection algorithms, in particular, often suffer when critical intra-community edges are missing. We propose a novel consensus clustering algorithm to enhance community detection on incomplete networks. Our framework utilizes existing community detection algorithms that process networks imputed by our link prediction based sampling algorithm and merges their multiple partitions into a final consensus output. On average our method boosts performance of existing algorithms by 7% on artificial data and 17% on ego networks collected from Facebook. |
format | Online Article Text |
id | pubmed-4874693 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-48746932016-06-09 Link-Prediction Enhanced Consensus Clustering for Complex Networks Burgess, Matthew Adar, Eytan Cafarella, Michael PLoS One Research Article Many real networks that are collected or inferred from data are incomplete due to missing edges. Missing edges can be inherent to the dataset (Facebook friend links will never be complete) or the result of sampling (one may only have access to a portion of the data). The consequence is that downstream analyses that “consume” the network will often yield less accurate results than if the edges were complete. Community detection algorithms, in particular, often suffer when critical intra-community edges are missing. We propose a novel consensus clustering algorithm to enhance community detection on incomplete networks. Our framework utilizes existing community detection algorithms that process networks imputed by our link prediction based sampling algorithm and merges their multiple partitions into a final consensus output. On average our method boosts performance of existing algorithms by 7% on artificial data and 17% on ego networks collected from Facebook. Public Library of Science 2016-05-20 /pmc/articles/PMC4874693/ /pubmed/27203750 http://dx.doi.org/10.1371/journal.pone.0153384 Text en © 2016 Burgess et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Burgess, Matthew Adar, Eytan Cafarella, Michael Link-Prediction Enhanced Consensus Clustering for Complex Networks |
title | Link-Prediction Enhanced Consensus Clustering for Complex Networks |
title_full | Link-Prediction Enhanced Consensus Clustering for Complex Networks |
title_fullStr | Link-Prediction Enhanced Consensus Clustering for Complex Networks |
title_full_unstemmed | Link-Prediction Enhanced Consensus Clustering for Complex Networks |
title_short | Link-Prediction Enhanced Consensus Clustering for Complex Networks |
title_sort | link-prediction enhanced consensus clustering for complex networks |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4874693/ https://www.ncbi.nlm.nih.gov/pubmed/27203750 http://dx.doi.org/10.1371/journal.pone.0153384 |
work_keys_str_mv | AT burgessmatthew linkpredictionenhancedconsensusclusteringforcomplexnetworks AT adareytan linkpredictionenhancedconsensusclusteringforcomplexnetworks AT cafarellamichael linkpredictionenhancedconsensusclusteringforcomplexnetworks |