High-quality genome sequence and description of Bacillus ndiopicus strain FF3(T) sp. nov.

Strain FF3(T) was isolated from the skin-flora of a 39-year-old healthy Senegalese man. Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry did not allow any identification. This strain exhibited a 16S rRNA sequence similarity of 96.8% with Bacillus massiliensis, the phyloge...

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Autores principales: Lo, C.I., Padhmanabhan, R., Mediannikov, O., Caputo, A., Michelle, C., Faye, N., Sokhna, C., Raoult, D., Fournier, P.-E., Fenollar, F.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2015
Materias:
New Microbes in Humans
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4877407/
https://www.ncbi.nlm.nih.gov/pubmed/27257496
http://dx.doi.org/10.1016/j.nmni.2015.10.009
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author Lo, C.I.
Padhmanabhan, R.
Mediannikov, O.
Caputo, A.
Michelle, C.
Faye, N.
Sokhna, C.
Raoult, D.
Fournier, P.-E.
Fenollar, F.
author_facet Lo, C.I.
Padhmanabhan, R.
Mediannikov, O.
Caputo, A.
Michelle, C.
Faye, N.
Sokhna, C.
Raoult, D.
Fournier, P.-E.
Fenollar, F.
author_sort Lo, C.I.
collection PubMed
description Strain FF3(T) was isolated from the skin-flora of a 39-year-old healthy Senegalese man. Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry did not allow any identification. This strain exhibited a 16S rRNA sequence similarity of 96.8% with Bacillus massiliensis, the phylogenetically closest species with standing nomenclature. Using a polyphasic study made of phenotypic and genomic analyses, strain FF3(T) was Gram-positive, aeroanaerobic and rod shaped and exhibited a genome of 4 068 720 bp with a G+C content of 37.03% that coded 3982 protein-coding and 67 RNA genes (including four rRNA operons). On the basis of these data, we propose the creation of Bacillus ndiopicus sp. nov.
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spelling pubmed-48774072016-06-02 High-quality genome sequence and description of Bacillus ndiopicus strain FF3(T) sp. nov. Lo, C.I. Padhmanabhan, R. Mediannikov, O. Caputo, A. Michelle, C. Faye, N. Sokhna, C. Raoult, D. Fournier, P.-E. Fenollar, F. New Microbes New Infect New Microbes in Humans Strain FF3(T) was isolated from the skin-flora of a 39-year-old healthy Senegalese man. Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry did not allow any identification. This strain exhibited a 16S rRNA sequence similarity of 96.8% with Bacillus massiliensis, the phylogenetically closest species with standing nomenclature. Using a polyphasic study made of phenotypic and genomic analyses, strain FF3(T) was Gram-positive, aeroanaerobic and rod shaped and exhibited a genome of 4 068 720 bp with a G+C content of 37.03% that coded 3982 protein-coding and 67 RNA genes (including four rRNA operons). On the basis of these data, we propose the creation of Bacillus ndiopicus sp. nov. Elsevier 2015-10-19 /pmc/articles/PMC4877407/ /pubmed/27257496 http://dx.doi.org/10.1016/j.nmni.2015.10.009 Text en © 2015 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle New Microbes in Humans
Lo, C.I.
Padhmanabhan, R.
Mediannikov, O.
Caputo, A.
Michelle, C.
Faye, N.
Sokhna, C.
Raoult, D.
Fournier, P.-E.
Fenollar, F.
High-quality genome sequence and description of Bacillus ndiopicus strain FF3(T) sp. nov.
title High-quality genome sequence and description of Bacillus ndiopicus strain FF3(T) sp. nov.
title_full High-quality genome sequence and description of Bacillus ndiopicus strain FF3(T) sp. nov.
title_fullStr High-quality genome sequence and description of Bacillus ndiopicus strain FF3(T) sp. nov.
title_full_unstemmed High-quality genome sequence and description of Bacillus ndiopicus strain FF3(T) sp. nov.
title_short High-quality genome sequence and description of Bacillus ndiopicus strain FF3(T) sp. nov.
title_sort high-quality genome sequence and description of bacillus ndiopicus strain ff3(t) sp. nov.
topic New Microbes in Humans
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4877407/
https://www.ncbi.nlm.nih.gov/pubmed/27257496
http://dx.doi.org/10.1016/j.nmni.2015.10.009
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