First genome sequences of buffalo coronavirus from water buffaloes in Bangladesh

We report the complete genome sequences of a buffalo coronavirus (BufCoV HKU26) detected from the faecal samples of two domestic water buffaloes (Bubalus bubalis) in Bangladesh. They possessed 98–99% nucleotide identities to bovine coronavirus (BCoV) genomes, supporting BufCoV HKU26 as a member of B...

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Autores principales: Lau, S.K.P., Tsang, A.K.L., Shakeel Ahmed, S., Mahbub Alam, M., Ahmed, Z., Wong, P.-C., Yuen, K.-Y., Woo, P.C.Y.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2016
Materias:
Taxonogenomics: Genome of a New Organism
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4879238/
https://www.ncbi.nlm.nih.gov/pubmed/27274850
http://dx.doi.org/10.1016/j.nmni.2016.02.011
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author Lau, S.K.P.
Tsang, A.K.L.
Shakeel Ahmed, S.
Mahbub Alam, M.
Ahmed, Z.
Wong, P.-C.
Yuen, K.-Y.
Woo, P.C.Y.
author_facet Lau, S.K.P.
Tsang, A.K.L.
Shakeel Ahmed, S.
Mahbub Alam, M.
Ahmed, Z.
Wong, P.-C.
Yuen, K.-Y.
Woo, P.C.Y.
author_sort Lau, S.K.P.
collection PubMed
description We report the complete genome sequences of a buffalo coronavirus (BufCoV HKU26) detected from the faecal samples of two domestic water buffaloes (Bubalus bubalis) in Bangladesh. They possessed 98–99% nucleotide identities to bovine coronavirus (BCoV) genomes, supporting BufCoV HKU26 as a member of Betacoronavirus 1. Nevertheless, BufCoV HKU26 possessed distinct accessory proteins between spike and envelope compared to BCoV. Sugar-binding residues in the N-terminal domain of S protein in BCoV are conserved in BufCoV HKU26.
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spelling pubmed-48792382016-06-03 First genome sequences of buffalo coronavirus from water buffaloes in Bangladesh Lau, S.K.P. Tsang, A.K.L. Shakeel Ahmed, S. Mahbub Alam, M. Ahmed, Z. Wong, P.-C. Yuen, K.-Y. Woo, P.C.Y. New Microbes New Infect Taxonogenomics: Genome of a New Organism We report the complete genome sequences of a buffalo coronavirus (BufCoV HKU26) detected from the faecal samples of two domestic water buffaloes (Bubalus bubalis) in Bangladesh. They possessed 98–99% nucleotide identities to bovine coronavirus (BCoV) genomes, supporting BufCoV HKU26 as a member of Betacoronavirus 1. Nevertheless, BufCoV HKU26 possessed distinct accessory proteins between spike and envelope compared to BCoV. Sugar-binding residues in the N-terminal domain of S protein in BCoV are conserved in BufCoV HKU26. Elsevier 2016-03-03 /pmc/articles/PMC4879238/ /pubmed/27274850 http://dx.doi.org/10.1016/j.nmni.2016.02.011 Text en © 2016 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Taxonogenomics: Genome of a New Organism
Lau, S.K.P.
Tsang, A.K.L.
Shakeel Ahmed, S.
Mahbub Alam, M.
Ahmed, Z.
Wong, P.-C.
Yuen, K.-Y.
Woo, P.C.Y.
First genome sequences of buffalo coronavirus from water buffaloes in Bangladesh
title First genome sequences of buffalo coronavirus from water buffaloes in Bangladesh
title_full First genome sequences of buffalo coronavirus from water buffaloes in Bangladesh
title_fullStr First genome sequences of buffalo coronavirus from water buffaloes in Bangladesh
title_full_unstemmed First genome sequences of buffalo coronavirus from water buffaloes in Bangladesh
title_short First genome sequences of buffalo coronavirus from water buffaloes in Bangladesh
title_sort first genome sequences of buffalo coronavirus from water buffaloes in bangladesh
topic Taxonogenomics: Genome of a New Organism
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4879238/
https://www.ncbi.nlm.nih.gov/pubmed/27274850
http://dx.doi.org/10.1016/j.nmni.2016.02.011
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