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Time Dependency of Chemodiversity and Biosynthetic Pathways: An LC-MS Metabolomic Study of Marine-Sourced Penicillium
This work aimed at studying metabolome variations of marine fungal strains along their growth to highlight the importance of the parameter “time” for new natural products discovery. An untargeted time-scale metabolomic study has been performed on two different marine-derived Penicillium strains. The...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4882577/ https://www.ncbi.nlm.nih.gov/pubmed/27213411 http://dx.doi.org/10.3390/md14050103 |
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author | Roullier, Catherine Bertrand, Samuel Blanchet, Elodie Peigné, Mathilde Robiou du Pont, Thibaut Guitton, Yann Pouchus, Yves François Grovel, Olivier |
author_facet | Roullier, Catherine Bertrand, Samuel Blanchet, Elodie Peigné, Mathilde Robiou du Pont, Thibaut Guitton, Yann Pouchus, Yves François Grovel, Olivier |
author_sort | Roullier, Catherine |
collection | PubMed |
description | This work aimed at studying metabolome variations of marine fungal strains along their growth to highlight the importance of the parameter “time” for new natural products discovery. An untargeted time-scale metabolomic study has been performed on two different marine-derived Penicillium strains. They were cultivated for 18 days and their crude extracts were analyzed by HPLC-DAD-HRMS (High Performance Liquid Chromatography-Diode Array Detector-High Resolution Mass Spectrometry) each day. With the example of griseofulvin biosynthesis, a pathway shared by both strains, this work provides a new approach to study biosynthetic pathway regulations, which could be applied to other metabolites and more particularly new ones. Moreover, the results of this study emphasize the interest of such an approach for the discovery of new chemical entities. In particular, at every harvesting time, previously undetected features were observed in the LC-MS (Liquid Chromatography-Mass Spectrometry) data. Therefore, harvesting times for metabolite extraction should be performed at different time points to access the hidden metabolome. |
format | Online Article Text |
id | pubmed-4882577 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-48825772016-05-27 Time Dependency of Chemodiversity and Biosynthetic Pathways: An LC-MS Metabolomic Study of Marine-Sourced Penicillium Roullier, Catherine Bertrand, Samuel Blanchet, Elodie Peigné, Mathilde Robiou du Pont, Thibaut Guitton, Yann Pouchus, Yves François Grovel, Olivier Mar Drugs Article This work aimed at studying metabolome variations of marine fungal strains along their growth to highlight the importance of the parameter “time” for new natural products discovery. An untargeted time-scale metabolomic study has been performed on two different marine-derived Penicillium strains. They were cultivated for 18 days and their crude extracts were analyzed by HPLC-DAD-HRMS (High Performance Liquid Chromatography-Diode Array Detector-High Resolution Mass Spectrometry) each day. With the example of griseofulvin biosynthesis, a pathway shared by both strains, this work provides a new approach to study biosynthetic pathway regulations, which could be applied to other metabolites and more particularly new ones. Moreover, the results of this study emphasize the interest of such an approach for the discovery of new chemical entities. In particular, at every harvesting time, previously undetected features were observed in the LC-MS (Liquid Chromatography-Mass Spectrometry) data. Therefore, harvesting times for metabolite extraction should be performed at different time points to access the hidden metabolome. MDPI 2016-05-21 /pmc/articles/PMC4882577/ /pubmed/27213411 http://dx.doi.org/10.3390/md14050103 Text en © 2016 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC-BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Roullier, Catherine Bertrand, Samuel Blanchet, Elodie Peigné, Mathilde Robiou du Pont, Thibaut Guitton, Yann Pouchus, Yves François Grovel, Olivier Time Dependency of Chemodiversity and Biosynthetic Pathways: An LC-MS Metabolomic Study of Marine-Sourced Penicillium |
title | Time Dependency of Chemodiversity and Biosynthetic Pathways: An LC-MS Metabolomic Study of Marine-Sourced Penicillium |
title_full | Time Dependency of Chemodiversity and Biosynthetic Pathways: An LC-MS Metabolomic Study of Marine-Sourced Penicillium |
title_fullStr | Time Dependency of Chemodiversity and Biosynthetic Pathways: An LC-MS Metabolomic Study of Marine-Sourced Penicillium |
title_full_unstemmed | Time Dependency of Chemodiversity and Biosynthetic Pathways: An LC-MS Metabolomic Study of Marine-Sourced Penicillium |
title_short | Time Dependency of Chemodiversity and Biosynthetic Pathways: An LC-MS Metabolomic Study of Marine-Sourced Penicillium |
title_sort | time dependency of chemodiversity and biosynthetic pathways: an lc-ms metabolomic study of marine-sourced penicillium |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4882577/ https://www.ncbi.nlm.nih.gov/pubmed/27213411 http://dx.doi.org/10.3390/md14050103 |
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